Job Description P80644 Confidence 34.92% Date Thu Jan 5 12:33:13 GMT 2012 Rank 318 Aligned Residues 101 % Identity 21% Template d1rbla1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.20

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.																.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																						.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V	Y	K	A	A	Y	S	.	.	.	G	A	L	K	T	L	L	D	L	L	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D	Y	A	L	K	P	V
Query Conservation																						.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.					.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																.	.																																																							.	.	.	.	.	.
Template Sequence		R	L	S	G	G	D	H	L	H	S	G	T	V	V	.	.	G	K	L	E	G	D	K	A	S	T	L	G	F	V	D	L	M	R	E	D	H	I	E	A	D	R	S	R	G	V	F	F	T	Q	D	W	A	S	M	P	G	V	L	P	V	A	S	G	G	I	H	V	W	H	.	.	.	.	.	.	M	P	A	L
Template Known Secondary structure							S							S	S	.	.	S	S	S																	S					B	G	G	G	T	B		S					T	T										S	S			G	G	G	.	.	.	.	.	.
Template Predicted Secondary structure																.	.																																																							.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.							.	.	.	390
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																									.	.	.	170	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	A	L	K	A	Q	E	I	L	H	G	V	F	A	D	D	S	Q	V	I	D	Y	H	H	R	P	Q	F	T	P	N	L	Q	T	R	L	D	T	A	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	W	Q	A	L	H	R
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		V	E	I	F	G	D	D	S	V	.	.	.	L	Q	F	G	G	G	T	L	G	H	P	W	G	N	A	P	G	A	T	A	N	R	V	A	L	E	A	C	V	Q	A	R	N	E	G	R	D	L	Y	R	E	G	G	D	I	L	R	E	A	G	K	W	S	P	E	L	A	A	A	L	D	L
Template Known Secondary structure							S	S			.	.	.				S					T	S	T	T																							T
Template Predicted Secondary structure											.	.	.
Template SS confidence
		391	.	.	.	.	.	.	.	.				400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions