Job Description P80644 Confidence 59.11% Date Thu Jan 5 12:33:13 GMT 2012 Rank 193 Aligned Residues 151 % Identity 13% Template c3rggD_ PDB info PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein; PDBTitle: crystal structure of treponema denticola pure bound to air Resolution 1.82 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	P	A	L	K	T	F	T	E	Q	L	Q	Q	A	D	.	.	G	L	I	V	A	T	P	V	Y	K	A
Query Conservation																																																																					.	.
Alig confidence										.	.	.	.																									.	.	.	.	.	.	.	.	.																							.	.
Template Conservation										.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		L	V	I	I	L	M	G	S	.	.	.	.	S	S	D	M	G	H	A	E	K	I	A	S	E	L	K	T	F	G	I	E	Y	A	I	R	.	.	.	.	.	.	.	.	.	I	G	S	A	H	K	T	A	E	H	V	V	S	M	L	K	E	Y	E	A	L	D	R	P	K	L	Y	I	T	I	A	G	R	S	N
Template Known Secondary structure								S	S	.	.	.	.	G	G	G														T	T							.	.	.	.	.	.	.	.	.				T	T	T														T	S	S	S										S	S
Template Predicted Secondary structure										.	.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.										.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	S	G	A	L	K	T	L	L	D	L	L	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D	Y	A	L	K	P	V	L	S	A	L	K	A	Q	E	I	L	H	G	V	F	A	D	D	S	Q	V	I	D	Y	H	H	R	P	Q	F	T	P	N	L	Q	T
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Sequence		A	L	S	G	F	V	.	.	.	.	.	.	.	.	.	D	G	F	V	K	G	A	T	I	A	C	P	P	P	S	D	S	F	A	G	A	.	.	.	.	D	I	Y	S	S	L	R	M	P	S	G	I	S	P	A	L	V	L	E	P	K	N	A	A	L	L	A	A	R	I	F	S	L	Y	D	K	E	I	A	D
Template Known Secondary structure								.	.	.	.	.	.	.	.	.				S	S	S											G	G	G	G	G	.	.	.	.	G	G								T	T							S	S													T	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		71	.	.	.	.	.										.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	D	T	A	L	E	T	F	W	Q	A	L	H	R	R	D	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	K	S	Y	M	E	S	N	A	Q	K	I	I	E	D	D	S	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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