Job Description P80644 Confidence 73.14% Date Thu Jan 5 12:33:13 GMT 2012 Rank 147 Aligned Residues 118 % Identity 15% Template c3pwzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase 3; PDBTitle: crystal structure of an ael1 enzyme from pseudomonas putida Resolution 1.71 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																				.	.	.	.	.	60	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	L	K	T	F	T	E
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		D	R	Y	A	V	I	G	R	P	I	N	H	T	K	S	P	L	I	H	G	L	F	A	Q	A	S	.	N	Q	Q	L	E	Y	G	A	I	E	G	S	L	D	D	F	E	A	Q	V	L	Q	F	R	S	E	G	G	K	G	M	N	I	T	A	P	F	K	L	R	A	F	E	L	A	D	R	R	S	E	R	A	Q
Template Known Secondary structure									S	S		T	T		S												T	.	T												T	T	T											T	T								T	T										S
Template Predicted Secondary structure																												.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		63	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		Q	L	Q	Q	A	D	G	L	I	V	.	.	.	A	T	P	V	Y	K	A	A	Y	S	G	A	L	K	T	L	L	D	L	L	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D	Y	A	L
Query Conservation												.	.	.
Alig confidence												.	.	.																						.
Template Conservation																																				.
Template Sequence		L	A	R	A	A	N	A	L	K	F	E	D	G	R	I	V	A	E	N	F	D	G	I	G	L	L	R	D	I	E	E	N	L	G	.	E	P	L	R	N	R	R	V	L	L	L	G	A	G	G	A	V	R	G	A	L	L	P	F	L	Q	A
Template Known Secondary structure				T			S						T	T																		T	T	S		.				T	T	S								S													T
Template Predicted Secondary structure																																				.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions