 |
| Job Description | P80644 | | Confidence | 40.06% | Date | Thu Jan 5 12:33:13 GMT 2012 |
| Rank | 288 | Aligned Residues | 66 |
| % Identity | 17% | Template | c3ojlA_ |
| PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:cap5o; |
PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus
|
| Resolution | 2.80 Å |
|
| | |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
. | . | . | . |
| Predicted Secondary structure | |
 | | | |  |
|
|
|
|
|
|
|  | | | | | | | | | | | | | | |
| . |
|
| | | | | | | | |
|
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | | | | | | |
|
|
| | | | | | . | . | |
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
| Query Sequence | |
V | I | T | L | A | G | S | P | R | F | P | S | R | S | S | S | L | L | E | Y | A | R | E | K | L | N | G | L | . |
D | V | E | V | Y | H | W | N | L | Q | N | F | A | P | E | D | L | L | Y | A | R | F | D | S | P | A | L | K | T | F | T | E | Q | L | Q | Q | A | D | G | L | I | V | A | T | . |
. |
P | V | Y | K |
| Query Conservation | |
|
| |
| |
|
| |
| | |
| |
| | |
|
| | | | | | |
| | | | . |
| | | | | | |
|
| | | | | | | | | | | | | | | | | | | | | | | | |
| | |
|
| |
|
|
| |
| . | . |
| |
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
| | |
| |
| |
| |
| | | | |
| | | |
| | | | |
| | |
| | | |
|
| |
| | | | | | | | . | . | . | . | . | . | . | . | . | . | | | | |
| | | |
|
| |
|
|
| |
| | | |
|
| |
| Template Sequence | |
V | F | G | L | T | Y | K | G | D | V | D | D | I | R | E | S | P | A | F | D | I | Y | E | L | L | N | Q | E | P | D | I | E | V | C | A | Y | D | P | H | V | E | L | D | F | V | E | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | M | S | H | A | V | K | D | A | S | L | V | L | I | L | S | D | H | S | E | F | K |
| Template Known Secondary structure | |
| |
|
| S | S | S | T | T |
|
|
|
| S | S |
| | | | | | | | | | | |
| T | T |
| | | |
|
|
| S | S | S |
|
| T | T |
|
|
| . | . | . | . | . | . | . | . | . | . |
| | | | | | T | T |
| S |
| | | |
| S |
|
| G | G | G | S |
| Template Predicted Secondary structure | |
| | | | | |
|
|
|
|
| | | | | | | | | | | | | | | | |
|
|
|
| | | | | |
|
|
|
|
| | | | | |
| . | . | . | . | . | . | . | . | . | . |
| | | | | |
|
|
|
| | | | | |
|
|
| | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
309 | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
