Job Description P80644 Confidence 74.32% Date Thu Jan 5 12:33:13 GMT 2012 Rank 141 Aligned Residues 104 % Identity 13% Template c3lvrE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium Resolution 3.38 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		M	R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	.	.	.	.	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	P	A	L	K	T	F	T	E	Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V
Query Conservation																																.	.	.	.
Alig confidence												.	.																			.	.	.	.																											.
Template Conservation												.	.																																																	.
Template Sequence		M	R	I	L	M	L	G	L	D	A	.	.	A	G	K	T	T	I	L	Y	K	L	K	L	G	Q	S	V	T	T	I	P	T	V	G	F	N	V	E	T	V	T	Y	K	N	V	K	F	N	V	W	D	V	G	G	Q	D	K	I	R	.	P	L	W	R	H	Y	Y	T	G	T	Q	G	L	I	F	V	V	D	C
Template Known Secondary structure									S	T	T	.	.	S	S											S	S								S	S									S	S												G	G	G	S	.	T	T	G	G	G	G	T	T	T										S
Template Predicted Secondary structure												.	.																																																	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		Y	K	A	A	Y	S	G	A	L	K	T	L	L	D	L	L	.	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		A	D	R	D	R	I	D	E	A	R	Q	E	L	H	R	I	I	N	D	R	E	M	R	D	A	I	I	L	I	F	A	N
Template Known Secondary structure		S			T	T													T	S	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions