Job Description P80644 Confidence 27.21% Date Thu Jan 5 12:33:13 GMT 2012 Rank 379 Aligned Residues 76 % Identity 12% Template c3h75A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:periplasmic sugar-binding domain protein; PDBTitle: crystal structure of a periplasmic sugar-binding protein from the2 pseudomonas fluorescens Resolution 1.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	P	A	L	K	T	F	T	E	Q	L	.	.	Q	Q	A	D	G	L	I	V	A	T	P	V	Y	K	A
Query Conservation																																																																	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	V	F	L	N	P	G	N	S	T	E	T	F	W	V	S	Y	S	Q	F	X	Q	A	A	A	R	D	L	G	L	D	L	R	I	L	Y	A	.	.	.	.	.	.	.	.	.	.	.	E	R	D	P	Q	N	T	L	Q	Q	A	R	E	L	F	Q	G	R	D	K	P	D	Y	L	X	L	V	N	E	Q	Y
Template Known Secondary structure									S		T	T																			T									.	.	.	.	.	.	.	.	.	.	.	T	T															S	S	S			S								S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90												.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	S	G	A	L	K	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	P	Q	I	L	R	L	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions