Job Description P80644 Confidence 99.91% Date Thu Jan 5 12:33:13 GMT 2012 Rank 24 Aligned Residues 153 % Identity 14% Template c3f2vA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 14; PDBTitle: crystal structure of the general stress protein 142 (tde0354) in complex with fmn from treponema denticola,3 northeast structural genomics consortium target tdr58. Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	P	A	L	K	T	F	T	E	Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V	Y	K	A	A	Y
Query Conservation
Alig confidence																	.	.																															.	.	.	.	.	.	.
Template Conservation																	.	.																															.	.	.	.	.	.	.
Template Sequence		K	T	L	I	I	L	A	H	P	N	I	S	Q	S	T	.	.	V	H	K	H	W	S	D	A	V	R	Q	H	T	D	R	F	T	V	H	E	L	Y	A	V	Y	P	Q	G	K	I	.	.	.	.	.	.	.	D	V	A	A	E	Q	K	L	I	E	T	H	D	S	L	V	W	Q	F	P	I	Y	W	F	N	C
Template Known Secondary structure										T	T	G	G	G		S	.	.										T	T		T	T	T											T	T				.	.	.	.	.	.	.											T	S	S	S								B	T	T	B
Template Predicted Secondary structure																	.	.																															.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.								.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		82	.	.	.	.	.	.	.	90	.	.										.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.												.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	A	L	K	T	L	L	D	L	L	.	.	.	.	.	.	.	.	.	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	.	.	.	.	.	.	.	.	.	.	.	L	A	V	D	Y	A	L	K	P	V	L	S	A	L	K	A	Q	E	I	L	H	G	V	F	A	D	D
Query Conservation													.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																																																																																	.
Template Sequence		P	P	L	L	K	Q	W	L	D	E	V	L	T	Y	G	W	A	Y	G	S	K	G	K	A	L	K	G	R	K	I	A	L	A	V	S	L	G	A	P	A	A	D	Y	R	A	D	G	A	V	G	C	S	V	A	E	V	L	R	P	F	E	L	T	A	K	Y	C	N	A	D	Y	R	P	P	F	T	F	H	T	.
Template Known Secondary structure													S		B	T	T	T	B	S	S	S			S	S	T	T										S	S		G	G	G	S	S	T	T	S	S	S		S																T	T												.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	V	I	D	Y	H	H	R	P	Q	F	T	P	N	L	Q	T	R	L	D	T	A	L	E	T	F	W	Q	A	L	H	R	R	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	A	R	Q	E	V	E	R	S	A	R	D	Y	L	A	W	L	D	A	L	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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