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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | |
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. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
R | V | I | T | L | A | G | S | P | R | F | P | S | . |
. |
R | S | S | S | L | L | E | Y | A | R | E | K | L | N | G | L | D | V | E | V | Y | H | W | N | L | Q | N | F | A | P | E | D | L | L | Y | A | R | F | D | S | P | A | L | K | T | F | T | E | Q | L | Q | Q | A | D | G | L | I | V | A | T | P | V | Y | K | A |
Query Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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| . | . |
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Template Conservation |   |
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|   |   |   |   | . | . | . | . | . |   |   |   |   |   |
|   |
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|   | . | . | . | . | . | . | . |   |   |
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Template Sequence |   |
M | I | L | I | I | Y | A | H | P | Y | P | H | H | S | H | A | N | K | R | M | L | E | Q | A | . |
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R | T | L | E | G | V | E | I | R | S | L | Y | Q | L | Y | P | D | . |
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F | N | I | D | I | A | A | E | Q | E | A | L | S | R | A | D | L | I | V | W | Q | H | P | M | Q | W | Y |
Template Known Secondary structure |   |
|  |  |  |  |  |
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| S |
| T | T | T |
| S |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  | T | S | T | T |  |  |  |  |  |  |  |  |  |
| T | T | . | . | . | . | . | . | . | S |
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|  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |
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| S | S |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
1001 | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | |
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. | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | |
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. | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . |
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80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
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. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
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110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . |
|  |  |  |  |
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| . | . | . | . | . | . | . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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| . |
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Query Sequence |   |
A | Y | S | G | A | L | K | T | L | L | D | L | L | . |
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P | E | R | A | L | Q | G | K | V | V | L | P | L | A | T | G | G | . |
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T | V | A | H | L | L | A | V | D | Y | A | L | K | P | V | L | S | A | L | K | A | Q | E | I | L | H | G | V | F | A | D | D |
Query Conservation |   |
  |   |   |   |   |
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| . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
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|   |   |   |   |
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|   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . |
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| . |
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Template Conservation |   |
|   |
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|   |
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|   |
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|   |
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|   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
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|   |
|   |   |   |   |
|   |   |   |
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|   |   |
|   |
|
|   |   |   | . |   |
Template Sequence |   |
S | I | P | P | L | L | K | L | W | I | D | K | V | F | S | H | G | W | A | Y | G | H | G | G | T | A | L | H | G | K | H | L | L | W | A | V | T | T | G | G | G | E | S | H | F | E | I | G | A | H | P | G | F | D | V | L | S | Q | P | L | Q | A | T | A | I | Y | C | G | L | N | W | L | P | P | F | A | M | H | . |
C |
Template Known Secondary structure |   |
S |
|
|  |  |  |  |  |  |  |  |  |  | S |
| B | T | T | T | B | S | S | S |
|
| T | T | T | T |
|  |  |  |  |  |  |  |
| S | S |
| G | G | G | G |
|
| S | S | S |
| S | G | G | G | G | G |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
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|
|  |  |  |
| . |
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Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  | . |
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Template SS confidence |   |
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  |   |
1069 | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | |
. |
  |
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
S | Q | V | I | D | Y | H | H | R | P | Q | F | T | P | N | L | Q | T | R | L | D | T | A | L | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
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Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
Template Sequence |   |
T | F | I | C | D | D | E | T | L | E | G | Q | A | R | H | Y | K | Q | R | L | L | E | W | Q | E |
Template Known Secondary structure |   |
| S | S |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
1148 | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . |
  |