Job Description P80644 Confidence 99.47% Date Thu Jan 5 12:33:13 GMT 2012 Rank 44 Aligned Residues 122 % Identity 17% Template c3edoA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:putative trp repressor binding protein; PDBTitle: crystal structure of flavoprotein in complex with fmn2 (yp_193882.1) from lactobacillus acidophilus ncfm at 1.203 a resolution Resolution 1.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50											.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	.	.	.	.	.	.	.	.	.	.	R	F	D	S	P	A	L	K	T	F	T	E	Q	L	Q	Q	A	D	G	L	I
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																.	.
Template Sequence		K	T	L	I	L	Y	Y	S	W	.	.	S	G	E	T	K	K	X	A	E	K	I	N	S	E	I	.	.	K	D	S	E	L	K	E	V	K	V	S	E	G	T	F	D	A	D	Y	K	T	S	D	I	A	L	D	Q	I	Q	G	N	K	D	F	P	E	I	Q	L	D	N	I	D	Y	N	N	Y	D	L	I	L
Template Known Secondary structure										S	.	.	S	S													S	.	.	T	T							B			T	T	S	S															T	T	S	S						B						G	G	G		S
Template Predicted Secondary structure											.	.																.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	T	P	V	Y	K	A	A	Y	S	G	A	L	K	T	L	L	D	L	L	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D	Y	A	L	K	P	V	L	S	A	L	K	A	Q
Query Conservation
Alig confidence																								.	.	.																								.
Template Conservation																								.	.	.																								.
Template Sequence		I	G	S	P	V	W	S	G	Y	P	A	T	P	I	K	T	L	L	D	Q	X	K	.	.	.	N	Y	R	G	E	V	A	S	F	F	T	S	A	G	T	N	H	K	A	Y	V	S	H	.	F	N	E	W	A	D	G	L	N	V	I
Template Known Secondary structure								T	T				T									T	T	.	.	.	T			S									S	S										.					T	T	T	S
Template Predicted Secondary structure																								.	.	.																								.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions