Return to main results Retrieve Phyre Job Id

Job DescriptionP80644
Confidence71.20%DateThu Jan 5 12:33:13 GMT 2012
Rank154Aligned Residues43
% Identity14%Templatec3e5nA_
PDB info PDB header:ligaseChain: A: PDB Molecule:d-alanine-d-alanine ligase a; PDBTitle: crystal strucutre of d-alanine-d-alanine ligase from2 xanthomonas oryzae pv. oryzae kacc10331
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1...... ..10.........20.........30.........40...
Predicted Secondary structure 
.












Query SS confidence 






.



































Query Sequence  MRVITLA. GSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFA
Query Conservation 



 
 .

 
  
 
  

      
   
      

    
Alig confidence 






.



































Template Conservation   

 

 

 
 
  

  

  
  

   
  
  
      
Template Sequence  IRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDKQG
Template Known Secondary structure 
SSTTS
TTT
TTS
Template Predicted Secondary structure 












Template SS confidence 











































   4.....10.........20.........30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions