Job Description P80644 Confidence 25.49% Date Thu Jan 5 12:33:13 GMT 2012 Rank 399 Aligned Residues 114 % Identity 15% Template c3donA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from staphylococcus2 epidermidis Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																				50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	F	D	S	P	A	L	K	T	F	T
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																									.
Template Sequence		M	K	.	F	A	V	I	G	N	P	I	S	H	S	L	S	P	L	M	H	H	A	N	F	Q	S	L	.	N	L	E	N	T	Y	E	A	I	N	V	P	V	N	Q	F	Q	D	I	K	K	I	I	S	E	K	S	I	D	G	F	N	V	T	I	P	H	K	E	R	I	I	P	Y	L	D	D	I	N	E	Q	A
Template Known Secondary structure				.						S	S		T	T														T	.	T												G	G	G	G	G	G								T	T		S						T	T		T	T	T	T	G	G	G		S
Template Predicted Secondary structure				.																									.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		E	Q	L	Q	Q	A	D	G	L	I	V	.	.	.	A	T	P	V	Y	K	A	A	Y	S	G	A	L	K	T	L	L	D	L	L	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D
Query Conservation													.	.	.
Alig confidence													.	.	.																							.	.
Template Conservation																																						.	.
Template Sequence		K	S	V	G	A	V	N	T	V	L	V	K	D	G	K	W	I	G	Y	N	T	D	G	I	G	Y	V	N	G	L	K	Q	I	Y	E	G	.	.	I	E	D	A	Y	I	L	I	L	G	A	G	G	A	S	K	G	I	A	N	E	L
Template Known Secondary structure					T									T	T																				S	T	T	.	.	G	G	G									S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions