Job Description P80644 Confidence 54.12% Date Thu Jan 5 12:33:13 GMT 2012 Rank 229 Aligned Residues 150 % Identity 10% Template c3ckyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-hydroxymethyl glutarate dehydrogenase; PDBTitle: structural and kinetic properties of a beta-hydroxyacid dehydrogenase2 involved in nicotinate fermentation Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		M	R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	.	.	.	F	D	S	P	A	L	K	T	F	T	E	Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V	Y
Query Conservation																																																					.	.	.
Alig confidence												.	.	.	.	.	.	.	.																																		.	.	.						.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.																																										.	.	.	.	.
Template Sequence		I	K	I	G	F	I	G	L	G	A	.	.	.	.	.	.	.	.	M	G	K	P	M	A	I	N	L	L	K	E	G	V	T	V	Y	A	F	D	L	M	E	A	N	V	A	A	V	V	A	Q	G	A	Q	A	C	E	N	N	Q	.	.	.	.	.	K	V	A	A	A	S	D	I	I	F	T	S	L	P	N	A
Template Known Secondary structure											T	.	.	.	.	.	.	.	.	T											T	T								S	S									T	T	T					S	S			.	.	.	.	.							S							S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																																										.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.									.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	Y	S	G	A	L	K	T	L	L	D	L	L	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D	Y	A	L	K	P	V	L	S	A	L	K	A	Q	E	I	L	H	G	V	F	A	D	D	S	Q	V	I	D	Y	H	H	R	P	Q	F	T	P	N	L
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	I	V	E	T	V	M	N	G	P	G	G	V	L	S	A	C	K	A	G	T	V	I	V	D	M	S	S	V	S	P	S	S	T	L	K	M	A	K	V	A	A	E	K	G	I	D	Y	V	D	A	P	V	S	G	G	T	K	G	A	E	A	G	T	L	T	I	M	V	G	A	S	E	A	V
Template Known Secondary structure		.	.	.	.	.									S	T	T						S		T	T																								T	T										S								T								S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	R	L	D	T	A	L	E	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	K	I	Q	P	V	L	S	V	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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