Job Description P80644 Confidence 87.25% Date Thu Jan 5 12:33:13 GMT 2012 Rank 92 Aligned Residues 106 % Identity 15% Template c3c7cB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:octopine dehydrogenase; PDBTitle: a structural basis for substrate and stereo selectivity in2 octopine dehydrogenase (odh-nadh-l-arginine) Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.																						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	.	D	V	E	V	Y	H	W	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	P	A	L	K
Query Conservation																																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.														.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.
Template Sequence		V	K	V	C	V	C	G	G	G	.	.	.	.	.	.	.	.	N	G	A	H	T	L	S	G	L	A	A	S	R	D	G	V	E	V	R	V	L	T	L	F	A	D	E	A	E	R	W	T	K	A	L	G	A	D	E	L	T	V	I	V	N	E	K	D	G	T	Q	T	E	V	K	S	R	P	K	V	I	T	K
Template Known Secondary structure										S	.	.	.	.	.	.	.	.											T	T	S	T	T									S	T	T										T	T	S									T	T	S										S				S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.									.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	T	E	Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V	Y	K	A	A	Y	S	G	A	L	K	T	L	L	D	L	L	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D	Y	A	L	K
Query Conservation
Alig confidence																					.	.	.	.	.	.																		.	.
Template Conservation																					.	.	.	.	.	.																		.	.
Template Sequence		D	P	E	I	A	I	S	G	A	D	V	V	I	L	T	V	P	A	F	.	.	.	.	.	.	A	H	E	G	Y	F	Q	A	M	A	P	Y	V	Q	D	S	A	.	.	L	I	V	G	L	P	S	Q	A	G	F	E	F	Q	C	R	D	I	L	G
Template Known Secondary structure								T	T		S						S		G	G	.	.	.	.	.	.	G									T	T	T			T	T		.	.					T	T			S	S										G
Template Predicted Secondary structure																					.	.	.	.	.	.																		.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions