Job Description P80644 Confidence 99.93% Date Thu Jan 5 12:33:13 GMT 2012 Rank 23 Aligned Residues 171 % Identity 18% Template c3b6iB_ PDB info PDB header:flavoprotein Chain: B: PDB Molecule:flavoprotein wrba; PDBTitle: wrba from escherichia coli, native structure Resolution 1.66 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.																								.	.
Query SS confidence																															.																								.	.
Query Sequence		R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	.	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	.	.	S	P	A	L	K	T	F	T	E	Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V	Y	K
Query Conservation																															.																								.	.
Alig confidence												.	.																		.																								.	.
Template Conservation												.	.
Template Sequence		K	V	L	V	L	Y	Y	S	M	Y	.	.	G	H	I	E	T	M	A	R	A	V	A	E	G	A	S	K	V	D	G	A	E	V	V	V	K	R	V	P	E	T	M	P	P	Q	L	F	E	K	A	G	G	K	T	Q	T	A	P	V	A	T	P	Q	E	L	A	D	Y	D	A	I	I	F	G	T	P	T	R	F
Template Known Secondary structure										S	S	.	.	S															T	S	T	T												S								T	T						S		B			S	G	G	G	G	G		S									B	T
Template Predicted Secondary structure												.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																.	.	.	.	.
Predicted Secondary structure																.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	Y	S	G	A	L	K	T	L	L	D	L	L	.	.	.	.	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D	Y	A	L	K	P	V	L	S	A	L	K	A	Q	E	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	V	F	A
Query Conservation																.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	M	S	G	Q	M	R	T	F	L	D	Q	T	G	G	L	W	A	S	G	A	L	Y	G	K	L	A	S	V	F	S	S	T	G	T	G	G	G	Q	E	Q	T	I	T	S	T	W	T	T	L	A	H	H	G	M	V	I	V	P	I	G	Y	A	A	Q	E	L	F	D	V	S	Q	V	R	G	G	T	P	Y
Template Known Secondary structure		T	B										T	T							T	T	T	T	T	T										S	S	S	T	T															T	T							T	T		S	G	G	G	G			S	S					B	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	S	Q	V	I	D	Y	H	H	R	P	Q	F	T	P	N	L	Q	T	R	L	D	T	A	L	E	T	F	W	Q	A	L	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	T	T	I	A	G	G	D	G	S	R	Q	P	S	Q	E	E	L	S	I	A	R	Y	Q	G	E	Y	V	A	G	L	A	V	K
Template Known Secondary structure		B							T	T	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions