Job Description P80644 Confidence 96.73% Date Thu Jan 5 12:33:13 GMT 2012 Rank 67 Aligned Residues 116 % Identity 13% Template c2x2oA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:nrdi protein; PDBTitle: the flavoprotein nrdi from bacillus cereus with the2 initially oxidized fmn cofactor in an intermediate3 radiation reduced state Resolution 1.13 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	P	A	L	K	T	F	T	E	Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V	Y	.	K	A	A	Y
Query Conservation																																																																													.
Alig confidence									.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation									.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	V	A	Y	D	S	.	.	M	T	G	N	V	K	R	F	I	H	K	L	N	M	P	A	V	Q	I	D	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	I	D	E	D	F	I	L	I	T	Y	T	T	G	F	G	N	V
Template Known Secondary structure									.	.	S	S	S										T	S							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S									B	T	T	T	B
Template Predicted Secondary structure									.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																															30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	A	L	K	T	L	L	D	L	L	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D	Y	A	L	K	P	V	L	S	A	L	K	A	Q	E	I	L	H	G	V	F	A	D	D	S	Q	V	I	D	Y	H	H	R	P	Q	F	T	P	N	L	Q	T	R	L
Query Conservation
Alig confidence															.	.	.	.	.																				.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.																				.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	R	V	L	D	F	L	E	R	N	N	E	.	.	.	.	.	K	L	K	G	V	S	A	S	G	N	R	N	W	G	D	M	F	G	A	.	S	A	D	K	I	S	T	K	Y	E	V	P	I	V	S	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	S	G	T	N	N	D	V	E	Y	F
Template Known Secondary structure													G	G	.	.	.	.	.	G										G	G	G	G	G	G	T	T		.										T								.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure															.	.	.	.	.																				.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.														.	.	100	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	A	L	E	T	F	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	R	V	R	E	I	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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