Job Description P80644 Confidence 28.88% Date Thu Jan 5 12:33:13 GMT 2012 Rank 365 Aligned Residues 101 % Identity 12% Template c2w58B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:primosome component (helicase loader); PDBTitle: crystal structure of the dnai Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	P	A	L	K	T	F	T	E	Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V	Y	K	A	A	Y
Query Conservation
Alig confidence											.								.																							.	.
Template Conservation											.								.																							.	.
Template Sequence		K	G	L	Y	L	H	G	S	F	.	G	V	G	K	T	Y	L	.	L	A	A	I	A	N	E	L	A	K	R	N	V	S	S	L	I	V	Y	V	P	E	.	.	L	F	R	E	L	K	H	S	L	Q	D	Q	T	M	N	E	K	L	D	Y	I	K	K	V	P	V	L	M	L	D	D	L	G	A	E	A	S	S
Template Known Secondary structure									S	S	.	S	S	S					.											S	S											.	.						T	T	T		S	S	S	T												S	S								S	S
Template Predicted Secondary structure											.								.																							.	.
Template SS confidence
		1162	.	.	.	.	.	.	.	1170		.	.	.	.	.	.	.		.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.			1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	A	L	K	T	L	L	D	L	L	P	E	R	A	L	Q	G	K	V	V	L	P	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	V	R	D	D	V	F	G	P	I	L	Q	Y	R	M	F	E	N	L	P	T	F	F	T	S
Template Known Secondary structure							T											T	T
Template Predicted Secondary structure
Template SS confidence
		1239	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions