Job Description P80644 Confidence 99.94% Date Thu Jan 5 12:33:13 GMT 2012 Rank 21 Aligned Residues 157 % Identity 25% Template c2v9cA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:fmn-dependent nadh-azoreductase 1; PDBTitle: x-ray crystallographic structure of a pseudomonas2 aeruginosa azoreductase in complex with methyl red. Resolution 2.18 Å

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		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																		.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure													.																			.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																			.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	I	T	L	A	G	S	P	R	F	.	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	.	.	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	D	S	P	A	L	K	T	F	T
Query Conservation													.																			.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																			.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	L	A	V	H	A	S	P	R	G	E	R	S	Q	S	R	R	L	A	E	V	F	L	A	A	Y	R	E	A	H	P	Q	A	R	V	A	R	R	E	V	G	R	V	P	L	P	A	V	T	E	A	F	V	A	A	A	F	H	P	Q	P	E	Q	R	S	L	A	M	Q	A	D	L	A	L	S	D	Q	L	V
Template Known Secondary structure										S		S	T	T																			T	T								S	S	S	S														T		S	S	G	G	G									T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.									.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		E	Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V	Y	K	A	A	Y	S	G	A	L	K	T	L	L	D	L	L	P	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	.	.	.	.	.	.	.	.	H	L	L	A	V	D
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	L	F	D	S	D	L	L	V	I	S	T	P	M	Y	N	F	S	V	P	S	G	L	K	A	W	I	D	Q	I	V	R	L	G	V	T	F	D	F	V	L	D	V	A	Q	Y	R	P	L	L	R	G	K	R	A	L	I	V	T	S	R	G	G	H	G	F	G	P	G	G	E	N	Q	A	M	N	H	A	D
Template Known Secondary structure						T		S									B	T	T	B															B	T	T	T																S										S	S	S			S	T	T		T	T	G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	L	K	P	V	L	S	A	L	K	A	Q	E	I	L	H	G	V	F	A	D	D	S	Q	V	I	D	Y	H	H	R	P	Q	F	T	P	N	L	Q	T	R	L	D	T	A	L	E	T	F	W	Q
Query Conservation
Alig confidence																		.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	W	L	R	T	A	L	G	F	I	G	I	D	E	V	T	.	V	V	A	A	E	G	S	F	.	.	.	.	.	.	.	.	.	.	.	E	D	S	C	D	E	A	E	Q	R	L	L	A	L	A	R
Template Known Secondary structure											T	T						.									.	.	.	.	.	.	.	.	.	.	.																T
Template Predicted Secondary structure																		.									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.												.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions