Job Description P80644 Confidence 39.11% Date Thu Jan 5 12:33:13 GMT 2012 Rank 292 Aligned Residues 77 % Identity 18% Template c2g1uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution Resolution 1.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50							.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.														.
Query SS confidence																																																			.	.	.	.	.	.														.
Query Sequence		R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	.	.	.	.	.	.	R	F	D	S	P	A	L	K	T	F	T	E	Q	.	L	Q	Q	A	D	G	L	I	V	A	T
Query Conservation																																																			.	.	.	.	.	.														.
Alig confidence												.	.	.	.	.	.	.																																	.	.	.	.	.	.														.
Template Conservation												.	.	.	.	.	.	.
Template Sequence		K	Y	I	V	I	F	G	C	G	R	.	.	.	.	.	.	.	L	G	S	L	I	A	N	L	A	S	S	S	G	H	S	V	V	V	V	D	K	N	E	Y	A	F	H	R	L	N	S	E	F	S	G	F	T	V	V	G	D	A	A	E	F	E	T	L	K	E	C	G	M	E	K	A	D	M	V	F	A	F	T
Template Known Secondary structure										S		.	.	.	.	.	.	.												T	T								S		G	G	G	G	G	G	S		T	T			S					S		T	T	S						T	T	T	G	G	G		S						S
Template Predicted Secondary structure												.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.								.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		75	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	Y	K	A	A	Y	S	G	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	D	D	S	T	N	F	F	I	S	M
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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