Job Description P80644 Confidence 66.09% Date Thu Jan 5 12:33:13 GMT 2012 Rank 167 Aligned Residues 76 % Identity 8% Template c2fqxA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:membrane lipoprotein tmpc; PDBTitle: pnra from treponema pallidum complexed with guanosine Resolution 1.70 Å

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		1	.	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																																																												.
Query SS confidence									.	.																																																												.
Query Sequence		M	R	V	I	T	L	A	.	.	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	P	A	L	K	T	F	T	E	Q	L	Q	Q	.	A	D	G	L	I	V	A	T	P	V	Y
Query Conservation									.	.																																																												.
Alig confidence									.	.																																			.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	V	G	M	V	T	D	S	G	D	I	D	D	K	S	F	N	Q	Q	V	W	E	G	I	S	R	F	A	Q	E	N	N	A	K	C	K	Y	V	T	A	S	T	.	.	.	.	.	.	.	.	.	.	.	D	A	E	Y	V	P	S	L	S	A	F	A	D	E	N	M	G	L	V	V	A	C	G	S	F	L
Template Known Secondary structure									S	S	S		T	T	S	S	S																T	T										S	.	.	.	.	.	.	.	.	.	.	.	G	G	G											T	T		S						S	T	T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.												.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	Y	S	G	A	L	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	A	V	I	E	T	S	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions