Job Description P80644 Confidence 30.12% Date Thu Jan 5 12:33:13 GMT 2012 Rank 357 Aligned Residues 119 % Identity 11% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	P	A	L	K	T	F	T	E	Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V	Y	K	A	A
Query Conservation
Alig confidence											.	.	.									.	.	.																																														.
Template Conservation											.	.	.									.	.	.																																														.
Template Sequence		V	R	H	I	H	F	V	G	I	.	.	.	G	G	A	G	X	G	G	I	.	.	.	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	L	X	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	V	R	D	A	S	.	V	V	V	V	S	S	A	I	S	A	D
Template Known Secondary structure									T	T	.	.	.	T	S	T	T					.	.	.							T	T								S	S											T	T					S	S			G	G	G	G	T	T		S	.						T	T			T	T
Template Predicted Secondary structure											.	.	.									.	.	.																																														.
Template SS confidence
		19	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.
		81	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.
Query Sequence		Y	S	G	A	L	K	T	L	L	D	L	L	P	.	.	.	.	.	.	.	.	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D	Y	A	L	K	P	V	L	S	A	L	K
Query Conservation															.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.														.	.	.
Template Conservation																																				.	.	.
Template Sequence		N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	A	E	X	L	A	E	L	X	R	F	R	H	G	I	A	I	A	.	.	.	G	T	H	G	K	T	T	T	T	A	X	V	S	S	I	Y	A	E	A	G
Template Known Secondary structure											T	T															T	T	S							.	.	.	S	S	S																T	T
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions