Job Description P80644 Confidence 99.84% Date Thu Jan 5 12:33:13 GMT 2012 Rank 28 Aligned Residues 144 % Identity 19% Template c2amjD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:modulator of drug activity b; PDBTitle: crystal structure of modulator of drug activity b from escherichia2 coli o157:h7 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	P	A	L	K	T	F	T	E	Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V	Y	K	A	A
Query Conservation
Alig confidence												.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	I	L	I	I	N	G	A	K	.	.	.	.	.	N	D	T	L	T	E	V	A	D	G	T	L	R	D	L	G	H	D	V	R	I	V	R	A	D	S	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	D	V	K	A	E	V	Q	N	F	L	W	A	D	V	V	I	W	Q	X	P	G	W	W	X	G
Template Known Secondary structure												.	.	.	.	.														T	T	T								T	T	S			.	.	.	.	.	.	.	.	.	.	.	.													S									S	S	S	S
Template Predicted Secondary structure												.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50													.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.															.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.														.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	G	A	L	K	T	L	L	D	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	L	L	A	V	D	Y	A	L	K	P	V	L	S	A	L	K	A	Q	E	I
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	W	T	V	K	K	Y	I	D	D	V	F	T	E	G	H	G	T	L	Y	A	S	K	Y	G	S	G	G	L	V	Q	G	K	K	Y	X	L	S	L	T	W	N	A	P	X	E	A	F	T	E	K	D	Q	F	F	H	G	V	G	V	D	G	V	Y	L	P	F	H	K	A	N	Q	F	L	G	X	E	P	L
Template Known Secondary structure																	T	B	T	T	T	B				T	T			B	S		T	T										S	S		T						T	T	S	T	T	T	T							T										T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	G	V	F	A	D	D	S	Q	V	I	D	Y	H	H	R	P	Q	F	T	P	N	L	Q	T	R	L	D	T	A
Query Conservation
Alig confidence								.	.	.
Template Conservation								.	.	.
Template Sequence		P	T	F	I	A	N	.	.	.	D	V	I	K	X	P	D	V	P	R	Y	T	E	E	Y	R	K	H	L	V	E	I
Template Known Secondary structure								.	.	.		T	T	T	S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		175	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions