Job Description P80644 Confidence 99.54% Date Thu Jan 5 12:33:13 GMT 2012 Rank 42 Aligned Residues 143 % Identity 13% Template c1vmeB_ PDB info PDB header:electron transport Chain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	P	A	L	K	T	F	T	E	Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V	Y	K	A	A	Y
Query Conservation
Alig confidence											.	.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	T	V	I	Y	D	S	X	.	.	Y	G	F	V	E	N	V	X	K	K	A	I	D	S	L	K	E	K	G	F	T	P	V	V	Y	K	F	S	D	E	E	R	P	A	.	.	.	.	.	.	.	.	.	.	I	S	E	I	L	K	D	I	P	D	S	E	A	L	I	F	G	V	S	T	Y	E	A	E	I
Template Known Secondary structure										S	.	.	S	S																T	T										S	S					.	.	.	.	.	.	.	.	.	.								S	T	T		S										T	T
Template Predicted Secondary structure											.	.																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.											.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	A	L	K	T	L	L	D	L	L	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D	Y	A	L	K	P	V	L	S	A	L	K	A	Q	E	I	L	H	G	V	F	A	D	D	S	Q	V	I	D	Y	H	H	R	P	Q	F	T	P	N	L	Q	T	R	L
Query Conservation
Alig confidence																																					.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		H	P	L	X	R	F	T	L	L	E	I	I	D	K	A	N	Y	E	K	P	V	L	V	F	G	V	H	G	W	A	P	S	A	E	R	.	.	.	T	A	G	E	L	L	K	E	T	K	F	R	I	L	S	F	T	E	I	.	.	.	.	.	.	.	.	.	K	G	S	N	X	D	E	R	K	I	E	E	A	I
Template Known Secondary structure																																	T	T	S		.	.	.								T	S	S										.	.	.	.	.	.	.	.	.		S	S	S			T
Template Predicted Secondary structure																																					.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.				.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.										.	.	.	380	.	.	.	.	.	.	.	.	.	390
		162	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	A	L	E	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	L	K	K	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions