Job Description P80644 Confidence 65.02% Date Thu Jan 5 12:33:13 GMT 2012 Rank 169 Aligned Residues 118 % Identity 18% Template c1nytC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+ Resolution 1.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																				.	.	.	.	.	60	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	L	K	T	F	T
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		M	E	T	Y	A	V	F	G	N	P	I	A	H	S	K	S	P	F	I	H	Q	Q	F	A	Q	Q	L	.	N	I	E	H	P	Y	G	R	V	L	A	P	I	N	D	F	I	N	T	L	N	A	F	F	S	A	G	G	K	G	A	N	V	T	V	P	F	K	E	E	A	F	A	R	A	D	E	L	T	E	R	A
Template Known Secondary structure				S						S	S		T	T		S													.	T												T	T												T	T								T	T										S
Template Predicted Secondary structure																													.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		E	Q	L	Q	Q	A	D	G	L	I	V	A	.	.	.	.	T	P	V	Y	K	A	A	Y	S	G	A	L	K	T	L	L	D	L	L	P	E	R	A	L	Q	G	K	V	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D	Y	A	L
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.																						.	.
Template Conservation																																							.	.
Template Sequence		A	L	A	G	A	V	N	T	L	M	R	L	E	D	G	R	L	L	G	D	N	T	D	G	V	G	L	L	S	D	L	E	R	L	S	F	I	.	.	R	P	G	L	R	I	L	L	I	G	A	G	G	A	S	R	G	V	L	L	P	L	L	S	L
Template Known Secondary structure					T	S		S						T	T	S																				T			.	.		T	T									S													T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions