Return to main results Retrieve Phyre Job Id

Job DescriptionP80644
Confidence41.47%DateThu Jan 5 12:33:13 GMT 2012
Rank276Aligned Residues148
% Identity14%Templatec1mvlA_
PDB info PDB header:lyaseChain: A: PDB Molecule:ppc decarboxylase athal3a; PDBTitle: ppc decarboxylase mutant c175s
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30........ .40.........50.........60. .....
Predicted Secondary structure 









.......













.........
Query SS confidence 



































. . . . . . .






















. . . . . . . . .




Query Sequence  VITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWN. . . . . . . LQNFAPEDLLYARFDSPALKTFT. . . . . . . . . EQLQQ
Query Conservation 

 
 

 
  
 
  

      
   
      
.......
                      .........  
  
Alig confidence 






....










.



.







.......






















.........




Template Conservation 

 



....  
     

 . 
  .   
 

 
  
   
                             

 
   
Template Sequence  LLAASGS. . . . VAAIKFGNLCH. CFTE. WAEVRAVVTKSSLHFLDKLSLPQEVTLYTDEDEWSSWNKIGDPVLHIELRRW
Template Known Secondary structure 
SS....GGGGG.T.TS
TGGGGT

GGGS
TT

TT
SSTTS

Template Predicted Secondary structure 
.....
.
























Template SS confidence 















































































   23...... 30.........40 .... .....50.........60.........70.........80.........90......
 
   67..70.........80.........90....... ..100.........110.........120.........130.........140..
Predicted Secondary structure 










....














Query SS confidence 






























. . . .












































Query Sequence  ADGLIVATPVYKAAYSGALKTLLDLLPERAL. . . . QGKVVLPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDS
Query Conservation 

 


 

 
       

  

 
     .... 

    
 
 
           
   
  

             
Alig confidence 










.


















....





































.......
Template Conservation 

 






 .






 







    
    




 



  
   
    

  
   
  

 
.......
Template Sequence  ADVLVIAPLSA. NTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPP. . . . . . .
Template Known Secondary structure 
S
.T

SST

TTS



ST



.......
Template Predicted Secondary structure 




.





















.......
Template SS confidence 















































































   97..100....... ..110.........120.........130.........140.........150.........160........
 
   143......150.........160.......
Predicted Secondary structure 









Query SS confidence 
























Query Sequence  QVIDYHHRPQFTPNLQTRLDTALET
Query Conservation                    
      
Alig confidence  ...





















Template Conservation  ...   
 
  
  
   
      
Template Sequence  . . . IKNGAMAEPSLIYSTVRLFWES
Template Known Secondary structure  ...B


B


Template Predicted Secondary structure  ...








Template SS confidence 
























   169170.........180.........190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions