Job Description P80644 Confidence 47.91% Date Thu Jan 5 12:33:13 GMT 2012 Rank 252 Aligned Residues 115 % Identity 11% Template c1mv8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa Resolution 1.55 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60																	.	.
Predicted Secondary structure																																																							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	V	I	T	L	A	G	S	P	R	F	P	S	R	S	S	S	L	L	E	Y	A	R	E	K	L	N	G	L	D	V	E	V	Y	H	W	N	L	Q	N	F	A	P	E	D	L	L	Y	A	R	F	D	.	.	S	P	A	L	K	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E
Query Conservation																																																							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.			.	.	.														.	.	.	.																									.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.			.	.	.														.	.	.	.
Template Sequence		M	R	I	S	I	F	.	G	L	.	.	.	G	Y	V	G	A	V	C	A	G	C	L	S	A	.	.	.	.	R	G	H	E	V	I	G	V	D	V	S	S	T	K	I	D	L	I	N	Q	G	K	S	P	I	V	E	P	G	L	E	A	L	L	Q	Q	G	R	Q	T	G	R	L	S	G	T	T	D	F	K	K
Template Known Secondary structure								.			.	.	.	S	T	T											.	.	.	.	T	T								S										T	T			S	S			T	T											T	T						S
Template Predicted Secondary structure								.			.	.	.														.	.	.	.
Template SS confidence
		1	.	.	.	.	.		.	.				.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																.	.	.	.																										.	.
Query SS confidence																.	.	.	.																										.	.
Query Sequence		Q	L	Q	Q	A	D	G	L	I	V	A	T	P	V	.	.	.	.	Y	K	A	A	Y	S	G	A	L	K	T	L	L	D	L	L	P	E	R	A	L	Q	G	K	V	.	.	V	L	P	L	A	T	G	G	T	V	A	H	L	L	A	V	D	Y	A	L	K	P
Query Conservation																.	.	.	.																										.	.
Alig confidence																.	.	.	.																										.	.
Template Conservation
Template Sequence		A	V	L	D	S	D	V	S	F	I	C	V	G	T	P	S	K	K	N	G	D	L	D	L	G	Y	I	E	T	V	C	R	E	I	G	F	A	I	R	E	K	S	E	R	H	T	V	V	V	R	S	T	V	L	P	G	T	V	N	N	V	V	I	P	L	I	E
Template Known Secondary structure					T		S										B		T	T	S	S	B																	T	T			S								S				T	T					T
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions