Return to main results Retrieve Phyre Job Id

Job DescriptionP76515
Confidence17.76%DateThu Jan 5 12:23:55 GMT 2012
Rank9Aligned Residues54
% Identity22%Templatec3prjB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: role of packing defects in the evolution of allostery and induced fit2 in human udp-glucose dehydrogenase.
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.. .......30........ .40...... ...50..
Predicted Secondary structure 






.......................



.....

.............


Query SS confidence 








. . . . . . . . . . . . . . . . . . . . . . .















. . . . .







. . . . . . . . . . . . .





Query Sequence  GKCVPRDLK. . . . . . . . . . . . . . . . . . . . . . . VNETNAEYLVRKFDAL. . . . . EAKCAALE. . . . . . . . . . . . . NKIIPV
Query Conservation 



  


.......................












 

.....


 


 .............
  


Alig confidence 








.......................















.....







.............





Template Conservation 
 




   
   
   
              
              
        
 






  
 
 
 


  
Template Sequence  GSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYI
Template Known Secondary structure  SSSTT
TTT

TT


SSSTT



TT
Template Predicted Secondary structure 


























Template SS confidence 















































































   274.....280.........290.........300.........310.........320.........330.........340.........350...
 
   53......60.......
Predicted Secondary structure 






Query SS confidence 














Query Sequence  SAELPPANESVLLFD
Query Conservation 




  
 



 
Alig confidence 














Template Conservation 
  
   
  
   
Template Sequence  SKYLMDEGAHLHIYD
Template Known Secondary structure  TTT

Template Predicted Secondary structure 



Template SS confidence 














   354.....360........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions