Job Description P15028 Confidence 100.00% Date Thu Jan 5 11:34:12 GMT 2012 Rank 3 Aligned Residues 278 % Identity 18% Template c3pshA_ PDB info PDB header:metal transport Chain: A: PDB Molecule:protein hi_1472; PDBTitle: classification of a haemophilus influenzae abc transporter hi1470/712 through its cognate molybdate periplasmic binding protein mola (mola3 bound to molybdate) Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure										.																														.	.											.	.
Query SS confidence										.																														.	.											.	.
Query Sequence		A	T	V	Q	D	E	H	G	.	T	F	T	L	E	K	T	P	Q	R	I	V	V	L	E	L	S	F	A	D	A	L	A	A	V	D	V	I	P	.	.	I	G	I	A	D	D	N	D	A	K	.	.	R	I	L	P	E	V	R	A	H	L	K	P	W	Q	S	V	G	T	R	A	Q	P	S	L	E	A	I	A
Query Conservation										.																														.	.											.	.
Alig confidence										.																														.	.											.	.
Template Conservation
Template Sequence		R	I	I	T	D	Q	L	D	R	K	V	T	I	P	D	H	I	N	R	A	V	V	L	Q	H	Q	T	L	N	I	A	V	Q	L	D	A	T	K	Q	I	V	G	V	L	S	N	W	K	K	Q	L	G	K	N	Y	V	R	L	A	P	E	L	E	N	M	A	M	P	G	D	L	N	S	V	N	I	E	S	L	L
Template Known Secondary structure							T	T	S							S	S		S																T	T		G	G	G						T	T							T	T	G	G	G	T		G	G	G	G	G		B			B		S	S		B
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.																			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	K	P	D	L	I	I	A	D	S	S	R	H	A	G	V	Y	I	A	L	Q	Q	I	A	.	P	V	L	L	L	K	S	R	N	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	E	N	L	Q	S	A	A	I	I	G	E	M	V	G	K	K	R	E	M	Q	A	R	L
Query Conservation																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	K	P	D	V	V	F	V	T	N	Y	A	P	S	E	M	I	K	Q	I	S	D	V	N	I	P	V	V	A	I	S	L	R	T	G	E	V	G	E	K	G	K	L	N	P	T	L	T	D	E	D	K	A	Y	N	D	G	L	K	Q	G	I	E	L	I	A	E	V	F	E	K	K	Q	Q	G	D	E	L	V
Template Known Secondary structure			T			S						T	T											T	T	T								S			S		G	G	G	T	T		S	S				T	T																					T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		E	Q	H	K	E	R	M	A	Q	W	A	S	Q	L	P	K	.	.	G	T	R	V	A	F	G	T	S	R	E	Q	Q	F	N	L	H	T	Q	E	T	W	T	G	S	V	L	A	S	L	G	L	N	V	P	A	A	M	A	G	A	S	M	P	S	I	G	L	E	Q	L	L	A	V	N	P	A	W	L	L	V	A
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		K	A	A	F	A	N	R	K	L	L	A	D	R	L	G	D	V	S	A	D	K	R	V	R	T	Y	M	A	N	P	D	L	G	T	Y	G	S	G	K	Y	T	G	L	M	M	E	H	A	G	A	Y	N	V	A	A	A	T	I	K	G	F	K	Q	V	S	L	E	N	V	L	E	W	N	P	A	V	I	L	V	Q
Template Known Secondary structure						T	T									T	T			T	T	T	S							B	T	T	T					B	S	S									T	T				T	T	T	T	T		B	S															S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		H	Y	R	E	E	S	I	V	K	R	W	Q	Q	D	P	L	W	Q	M	L	T	A	A	Q	K	Q	Q	V	A	S	V	D	S	N	T	W	.	A	R	M	R	G	I	F	A	A	E	R	I	A	A	D	T	V	K	I	F	H	H	Q	P	L	T	V	V	K
Query Conservation																																						.
Alig confidence							.																															.
Template Conservation							.
Template Sequence		D	R	Y	P	D	.	V	V	P	Q	I	L	N	D	Q	G	W	A	N	I	Q	A	L	K	D	K	K	V	F	L	M	P	E	Y	A	K	A	W	G	Y	P	M	P	E	A	L	A	L	G	E	V	W	L	A	K	A	L	Y	P	Q	R	F	Q	D	V	D
Template Known Secondary structure		T	T		T	T	.							T		G	G	G	T	T	S					T	T							T	T					S	S								T											G	G	G		T	T
Template Predicted Secondary structure							.
Template SS confidence
		263	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions