Job Description P15028 Confidence 73.63% Date Thu Jan 5 11:34:12 GMT 2012 Rank 28 Aligned Residues 186 % Identity 15% Template c3pdiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		87	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure														.																							.																															.	.
Query SS confidence														.																							.																															.	.
Query Sequence		R	A	Q	P	S	L	E	A	I	A	A	L	.	K	P	D	L	I	I	A	D	S	S	R	H	A	G	V	Y	I	A	L	Q	Q	I	.	A	P	V	L	L	L	K	S	R	N	E	T	Y	A	E	N	L	Q	S	A	A	I	I	G	E	M	V	G	K	K	.	.	R	E	M	Q	A	R	L	E	Q	H	K	E
Query Conservation														.																							.																															.	.
Alig confidence														.																							.																															.	.
Template Conservation
Template Sequence		T	G	G	L	S	V	A	E	L	A	T	A	G	Q	S	V	A	T	L	V	V	G	Q	S	L	A	G	A	A	D	A	L	A	E	R	T	G	V	P	D	R	R	F	G	M	L	Y	G	L	D	A	V	D	A	W	L	M	A	L	A	E	I	S	G	N	P	V	P	D	R	Y	K	R	Q	R	A	Q	L	Q	D
Template Known Secondary structure		S		S	B						G	G	G	S	S		S						S	G	G	G											S										S																		S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.															.	220	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	M	A	Q	W	A	S	Q	L	P	K	G	T	R	V	A	F	G	T	S	R	E	Q	Q	F	N	L	H	T	Q	E	T	W	T	.	.	.	G	S	V	L	A	S	L	G	L	N	V	P	A	A	M	A	G	A	S	M	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	L	E	Q	L	L
Query Conservation																																				.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.														.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	M	L	D	T	H	F	M	L	S	.	.	.	.	.	.	.	.	.	.	.	S	A	R	T	A	I	A	A	D	P	D	L	L	L	G	F	D	A	L	L	R	S	M	G	A	H	T	V	A	A	V	V	P	A	R	A	A	A	L	V	D	S	P	L	P	S	V	R	V	G	D	L	E	D	L	E	H	A	A
Template Known Secondary structure											T	.	.	.	.	.	.	.	.	.	.	.	T																					T	T	T									S	S			S			T	T	T	T	S	S					S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.												.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		226		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure			.																																					.
Query SS confidence			.																																					.
Query Sequence		A	.	V	N	P	A	W	L	L	V	A	H	Y	R	E	E	S	I	V	K	R	W	Q	Q	D	P	L	W	Q	M	L	T	A	A	Q	K	Q	Q	.	V	A	S	V	D	S	N	T	W	A	R	M	R	G	I	F	A	A	E	R	I	A	A	D	T	V	K	I	F
Query Conservation			.																																					.
Alig confidence			.																		.	.	.	.	.	.	.	.												.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		R	A	G	Q	A	Q	L	V	I	G	N	S	H	A	L	A	S	A	R	.	.	.	.	.	.	.	.	R	L	G	V	P	L	L	R	A	G	F	P	Q	Y	D	L	L	G	G	F	Q	R	C	W	S	G	Y	R	G	S	S	Q	V	L	F	D	L	A	N	L	L
Template Known Secondary structure					T		S						T	T							.	.	.	.	.	.	.	.		T	T							S	S			T	T		T	T	G	G	G
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390									.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions