Job Description P15028 Confidence 100.00% Date Thu Jan 5 11:34:12 GMT 2012 Rank 12 Aligned Residues 248 % Identity 13% Template c3md9A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hemin-binding periplasmic protein hmut; PDBTitle: structure of apo form of a periplasmic heme binding protein Resolution 1.50 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		Q	R	I	V	V	L	E	L	S	F	A	D	A	L	A	A	V	D	V	I	P	I	G	I	A	D	D	N	D	A	K	R	I	L	P	E	V	R	A	H	L	K	P	W	Q	S	V	G	T	R	A	Q	P	S	L	E	A	I	A	A	L	K	P	D	L	I	I	A	D	S	S	R	.	H	A	G	V	Y	I	A
Query Conservation																																																																										.
Alig confidence																												.	.	.	.	.																																										.
Template Conservation																												.	.	.	.	.
Template Sequence		E	R	I	V	T	I	G	G	D	V	T	E	I	A	Y	A	L	G	A	G	D	E	I	V	A	R	.	.	.	.	.	D	S	T	S	Q	Q	P	Q	A	A	Q	K	L	P	D	V	G	Y	M	R	T	L	N	A	E	G	I	L	A	M	K	P	T	M	L	L	V	S	E	L	A	Q	P	S	L	V	L	T	Q
Template Known Secondary structure								S										T	T		G	G	G					.	.	.	.	.		T	T				S	G	G	G	G	G	S		B				T	T	S								T	T			S						T	T		S
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	Q	I	A	P	V	L	L	L	K	S	R	N	E	T	Y	A	E	N	L	Q	S	A	A	I	I	G	E	M	V	G	K	K	R	E	M	Q	A	R	L	E	Q	H	K	E	R	M	A	Q	W	A	S	Q	L	P	K	G	T	R	V	A	F	G	T	S	R	E	Q	Q	F	N	L	H	T	Q	E	T	W	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	S	S	G	V	N	V	V	T	V	P	G	Q	T	T	P	E	S	V	A	M	K	I	N	A	V	A	T	A	L	H	Q	T	E	K	G	Q	K	L	I	E	D	Y	Q	Q	R	L	A	A	V	N	K	T	P	L	P	V	K	V	L	F	V	M	S	H	G	G	L	T	P	M	A	A	G	Q	N	T	A	A
Template Known Secondary structure					T	T											S																T																		T	S			S			S										S	S	S							B	S	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		G	S	V	L	A	S	L	G	L	N	V	P	A	A	M	A	G	A	S	M	P	S	I	G	L	E	Q	L	L	A	V	N	P	A	W	L	L	V	A	H	Y	R	E	E	S	I	.	.	V	K	R	W	Q	Q	D	P	L	W	Q	M	L	T	A	A	Q	K	Q	Q	V	A	S	V	D	S	N	T	W	A	R	M
Query Conservation																																																.	.
Alig confidence																				.																												.	.																														.
Template Conservation																				.																																																											.
Template Sequence		D	A	M	I	R	A	A	G	G	S	N	A	M	Q	G	F	S	R	.	Y	R	P	L	S	Q	E	G	V	I	A	S	A	P	D	L	L	L	I	T	T	D	G	V	K	A	L	G	S	S	E	N	I	W	K	L	P	G	M	A	L	T	P	A	G	K	H	K	R	L	L	V	V	D	D	M	A	L	.	L	G
Template Known Secondary structure								T	T				S			S		B	S	.															S													S	S	G	G	G	G	G	G	S	T	T	G	G	G	S					T	T											.		S
Template Predicted Secondary structure																				.																																																											.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	I	F	A	A	E	R	I	A	A	D	T	V	K	I	F	H	H
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		F	G	L	E	T	P	Q	V	L	.	A	Q	L	R	E	K	M	E	Q
Template Known Secondary structure			S	T	T						.
Template Predicted Secondary structure											.
Template SS confidence
		260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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