Job Description P15028 Confidence 100.00% Date Thu Jan 5 11:34:12 GMT 2012 Rank 4 Aligned Residues 272 % Identity 19% Template c3gfvA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:uncharacterized abc transporter solute-binding PDBTitle: crystal structure of petrobactin-binding protein yclq from2 bacillu subtilis Resolution 1.75 Å

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		21	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		A	A	T	V	Q	D	E	H	G	.	.	T	F	T	L	E	K	T	P	Q	R	I	V	V	L	E	L	S	F	A	D	A	L	A	A	V	D	V	I	P	I	G	I	A	D	D	N	D	A	K	R	I	L	P	E	V	R	A	H	L	K	P	W	Q	S	V	G	T	R	A	Q	P	S	L	E	A	I	A	A	L
Query Conservation											.	.
Alig confidence											.	.																																													.
Template Conservation																																																									.
Template Sequence		Q	I	T	V	K	H	Q	L	D	K	N	G	T	K	V	P	K	N	P	K	K	V	V	V	F	D	F	G	S	L	D	T	L	D	K	L	G	L	D	D	I	V	A	G	L	P	K	Q	V	L	P	K	Y	L	S	.	K	F	K	D	D	K	Y	A	D	V	G	S	L	K	E	P	D	F	D	K	V	A	E	L
Template Known Secondary structure								T	T									S	S		S																T	T		G	G	G							S	S			G	G	G	G	.	G	G	G	S	T	T	S				B		S	S	S	B								T
Template Predicted Secondary structure																																																									.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.
Predicted Secondary structure																																					.																																									.
Query SS confidence																																					.																																									.
Query Sequence		K	P	D	L	I	I	A	D	S	S	R	H	A	G	V	Y	I	A	L	Q	Q	I	A	P	V	L	L	L	K	S	R	N	E	T	Y	.	A	E	N	L	Q	S	A	A	I	I	G	E	M	V	G	K	K	R	E	M	Q	A	R	L	E	Q	H	K	E	R	M	A	Q	W	A	S	Q	L	P	K	.	G	T	R
Query Conservation																																					.																																									.
Alig confidence								.																													.																																									.
Template Conservation								.
Template Sequence		D	P	D	L	I	I	.	I	S	A	R	Q	S	E	S	Y	K	E	F	S	K	I	A	P	T	I	Y	L	G	V	D	T	A	K	Y	X	E	S	F	K	S	D	A	E	T	I	G	K	I	F	D	K	E	D	K	V	K	D	E	L	A	N	I	D	H	S	I	A	D	V	K	K	T	A	E	K	L	N	K	N
Template Known Secondary structure				S				.			G	G	G	G	G	G								S									G	G	G																T	T																											T
Template Predicted Secondary structure								.
Template SS confidence
		95	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																					.	.																								.	.	.	.
Query SS confidence																																					.	.																								.	.	.	.
Query Sequence		V	A	F	G	T	S	R	E	Q	Q	F	N	L	H	T	Q	E	T	W	T	G	S	V	L	A	S	L	G	L	N	V	P	A	A	M	.	.	A	G	A	S	M	P	S	I	G	L	E	Q	L	L	A	V	N	P	A	W	L	L	V	.	.	.	.	A	H	Y	R	E	E	S	I	V	K	R	W	Q	Q	D	P
Query Conservation																																					.	.																								.	.	.	.
Alig confidence																																					.	.																								.	.	.	.
Template Conservation
Template Sequence		G	L	V	I	X	A	N	D	G	K	I	S	A	F	G	P	K	S	R	Y	G	L	I	H	D	V	F	G	V	A	P	A	D	Q	N	I	K	A	S	T	H	G	Q	S	V	S	Y	E	Y	I	S	K	T	N	P	D	Y	L	F	V	I	D	R	G	T	A	I	G	E	T	S	S	T	K	Q	V	V	E	N	D
Template Known Secondary structure									T	T							T	T	S	T	T	T					T	T					S		T	T					S	S															S												T	S									T		G
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		L	W	Q	M	L	T	A	A	Q	K	Q	Q	V	A	S	V	D	S	N	T	W	A	.	R	M	R	G	I	F	A	A	E	R	I	A	A	D	T	V	K	I	F	H	H	Q
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		Y	V	K	N	V	N	A	V	K	N	G	H	V	I	Y	L	D	S	A	T	W	Y	L	S	G	G	G	L	E	S	X	T	Q	X	I	K	E	V	K	D	G	L	E	K	E
Template Known Secondary structure		G	G	T	T	S					T	T															S	S																	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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