Job Description P15028 Confidence 100.00% Date Thu Jan 5 11:34:12 GMT 2012 Rank 16 Aligned Residues 244 % Identity 17% Template c3g9qA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ferrichrome-binding protein; PDBTitle: crystal structure of the fhud fold-family bsu3320, a periplasmic2 binding protein component of a fep/fec-like ferrichrome abc3 transporter from bacillus subtilis. northeast structural genomics4 consortium target sr577a Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	K	T	P	Q	R	I	V	V	L	E	L	S	F	A	D	A	L	A	A	V	D	V	I	P	I	G	I	A	D	D	N	D	A	K	R	I	L	P	E	V	R	A	H	L	K	P	W	Q	S	V	G	T	R	A	Q	P	S	L	E	A	I	A	A	L	K	P	D	L	I	I	A	D	S	S	R	H	A	G
Query Conservation
Alig confidence																																									.	.	.													.	.																								.
Template Conservation																																									.	.	.													.	.																								.
Template Sequence		I	P	K	H	P	K	R	V	V	V	X	A	D	G	Y	Y	G	Y	F	K	T	L	G	I	N	V	V	G	A	P	E	N	V	F	K	N	P	Y	Y	.	.	.	K	G	K	T	N	G	V	E	N	I	G	D	.	.	G	T	S	V	E	K	V	I	D	L	N	P	D	L	I	I	V	W	T	T	A	D	I	.
Template Known Secondary structure				S	S		S							G	G	G								T								G	G	G	G	T		T	T	T	.	.	.	T	T	T			T	T		B				.	.	S								T	T			S											.
Template Predicted Secondary structure																																									.	.	.													.	.																								.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		V	Y	I	A	L	Q	Q	I	A	P	V	L	L	L	K	S	R	N	E	T	Y	A	E	N	L	Q	S	A	A	I	I	G	E	M	V	G	K	K	R	E	M	Q	A	R	L	E	Q	H	K	E	R	M	A	Q	W	A	S	Q	L	P	.	.	.	K	G	T	R	V	A	F	G	T	S	R	E	Q	Q	F	N	L
Query Conservation																																																														.	.	.
Alig confidence		.	.																			.	.	.																																						.	.	.
Template Conservation		.	.																			.	.	.
Template Sequence		.	.	K	K	L	E	K	I	A	P	T	V	A	V	K	Y	D	K	L	D	.	.	.	N	I	E	Q	L	K	E	F	A	K	X	T	G	T	E	D	K	A	E	K	W	L	A	K	W	D	K	K	V	A	A	A	K	T	K	I	K	K	A	V	G	D	K	T	I	S	I	X	Q	T	N	G	K	D	I	Y	V
Template Known Secondary structure		.	.							S							T	T		S		.	.	.	S	S											T																												T	T		B								T	T
Template Predicted Secondary structure		.	.																			.	.	.
Template SS confidence
				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.									.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.
Query Sequence		H	T	Q	E	T	W	T	G	S	V	L	A	S	L	G	L	.	.	.	.	.	.	.	.	N	V	P	A	A	M	A	G	A	S	M	P	S	I	G	L	E	Q	L	L	A	V	N	P	A	W	L	L	V	A	H	Y	R	E	E	S	I	V	K	R	W	Q	Q	D	P	L	W	Q	M	L	T	A	A	Q	K	Q
Query Conservation																		.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		F	G	K	D	F	G	R	G	G	S	I	I	Y	K	D	L	G	L	Q	A	T	K	L	T	K	E	K	A	I	D	Q	G	P	G	Y	T	S	I	S	L	E	K	L	P	D	F	A	G	D	Y	I	F	A	G	P	W	Q	S	G	.	.	.	.	G	V	F	E	S	S	I	W	K	N	L	N	A	V	K	N	G
Template Known Secondary structure				S	S	S	S	T	T						T	T	S			B										T	T	T	S	S	S						T	T	S							S							S				.	.	.	.		T	T	T	S					T	S					T	T
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	A	S	V	D	S	N	T	W	A	R	M	R	G	I	F	A	A	E	R	I	A	A	D	T	V	K	I	F	H
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		H	V	Y	K	X	D	P	I	G	F	.	Y	F	T	D	P	I	S	L	E	G	Q	L	E	F	I	T	E	S	L	T
Template Known Secondary structure								T	T	G	G	.	G			S
Template Predicted Secondary structure												.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions