Job Description P15028 Confidence 100.00% Date Thu Jan 5 11:34:12 GMT 2012 Rank 1 Aligned Residues 276 % Identity 37% Template c3eiwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:htsa protein; PDBTitle: crystal structure of staphylococcus aureus lipoprotein, htsa Resolution 1.60 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	A	A	T	V	Q	D	E	H	G	T	F	T	L	E	K	T	P	Q	R	I	V	V	L	E	L	S	F	A	D	A	L	A	A	V	D	V	I	P	I	G	I	A	D	D	N	D	A	K	R	I	L	P	E	V	R	A	H	L	K	P	W	Q	S	V	G	T	R	A	Q	P	S	L	E	A	I	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	T	I	S	V	K	D	E	N	G	T	V	K	V	P	K	D	A	K	R	I	V	V	L	E	Y	S	F	A	D	A	L	A	A	L	D	V	K	P	V	G	I	A	D	D	G	K	K	K	R	I	I	K	P	V	R	E	K	I	G	D	Y	T	S	V	G	T	R	K	Q	P	N	L	E	E	I	S	K	L
Template Known Secondary structure										T	T							T	T							S	S										T	T				S					T	T		G	G	G	S										S					B		S	S	S	B								T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		K	P	D	L	I	I	A	D	S	S	R	H	A	G	V	Y	I	A	L	Q	Q	I	A	P	V	L	L	L	K	S	R	N	E	T	Y	A	E	N	L	Q	S	A	A	I	I	G	E	M	V	G	K	K	R	E	M	Q	A	R	L	E	Q	H	K	E	R	M	A	Q	W	A	S	Q	L	P	K	.	.	G	T	R
Query Conservation																																																																													.	.
Alig confidence																																																																													.	.
Template Conservation
Template Sequence		K	P	D	L	I	I	A	D	S	S	R	H	K	G	I	N	K	E	L	N	K	I	A	P	T	L	S	L	K	S	F	D	G	D	Y	K	Q	N	I	N	S	F	K	T	I	A	K	A	L	N	K	E	K	E	G	E	K	R	L	A	E	H	D	K	L	I	N	K	Y	K	D	E	I	K	F	D	R	N	Q	K
Template Known Secondary structure				S						T	T	T	T	T	T	T								S							S	T	T																	T	T																									S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.										.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		V	A	F	G	T	S	R	E	Q	Q	F	N	L	H	T	Q	E	T	W	T	G	S	V	L	A	S	L	G	L	N	V	P	A	A	M	.	.	.	.	.	.	.	.	.	A	G	A	S	M	P	S	I	G	L	E	Q	L	L	A	V	N	P	A	W	L	L	V	.	.	.	A	H	Y	R	E	E	S	I	V	K
Query Conservation																																					.	.	.	.	.	.	.	.	.																								.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation
Template Sequence		V	L	P	A	V	V	A	K	A	G	L	L	A	H	P	N	Y	S	Y	V	G	Q	F	L	N	E	L	G	F	K	N	A	L	S	D	D	V	T	K	G	L	S	K	Y	L	K	G	P	Y	L	Q	L	D	T	E	H	L	A	D	L	N	P	E	R	M	I	I	M	T	D	H	A	K	K	D	S	A	E	F	K
Template Known Secondary structure									T	T							T	T	S									T	T			B	S	S							T	T	G	G	G			T	T															S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	Q	Q	D	P	L	W	Q	M	L	T	A	A	Q	K	Q	Q	V	A	S	V	D	S	N	T	W	A	R	M	R	G	I	F	A	A	E	R	I	A	A	D	T	V	K	I	F	H	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	Q	E	D	A	T	W	K	K	L	N	A	V	K	N	N	R	V	D	I	V	D	R	D	V	W	A	R	S	R	G	L	I	S	S	E	E	M	A	K	E	L	V	E	L	S	K	K	E
Template Known Secondary structure											T						T	T											T	T	T		S																	S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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