Job Description P15028 Confidence 100.00% Date Thu Jan 5 11:34:12 GMT 2012 Rank 5 Aligned Residues 269 % Identity 20% Template c3be5D_ PDB info PDB header:metal transport Chain: D: PDB Molecule:putative iron compound-binding protein of abc transporter PDBTitle: crystal structure of fite (crystal form 1), a group iii periplasmic2 siderophore binding protein Resolution 2.20 Å

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		22	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure										.																	.																						.	.	.	.	.	.	.	.
Query SS confidence										.																	.																						.	.	.	.	.	.	.	.
Query Sequence		A	T	V	Q	D	E	H	G	.	T	F	T	L	E	K	T	P	Q	R	I	V	V	L	E	L	.	S	F	A	D	A	L	A	A	V	D	V	I	P	I	G	I	A	D	D	N	D	.	.	.	.	.	.	.	.	A	K	R	I	L	P	E	V	R	A	H	L	K	P	W	Q	S	V	G	T	R	A	Q	P	S
Query Conservation										.																	.																						.	.	.	.	.	.	.	.
Alig confidence										.																	.																						.	.	.	.	.	.	.	.																					.
Template Conservation																																																																													.
Template Sequence		Q	V	F	T	D	D	L	G	R	K	V	T	V	P	A	H	P	K	R	I	V	S	L	H	D	L	D	I	T	I	P	L	I	E	L	G	V	P	P	V	A	S	H	G	R	T	R	P	D	G	S	H	F	I	R	S	G	A	L	L	T	G	V	D	F	D	N	S	S	I	A	F	I	G	T	.	A	D	I	D
Template Known Secondary structure							T	T								S	S		S	S				S		T	T	T	T							T	T				S								T	T	S					T	T						S			G	G	G	S							S	.	S	S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	I	A	A	L	K	P	D	L	I	I	A	D	S	S	R	H	A	G	V	Y	I	A	L	Q	Q	I	A	P	V	L	L	L	K	S	R	N	E	T	Y	A	E	N	L	Q	S	A	A	I	I	G	E	M	V	G	K	K	R	E	M	Q	A	R	L	E	Q	H	K	E	R	M	A	Q	W	A	S	Q	L
Query Conservation
Alig confidence																								.																			.	.	.
Template Conservation																								.																			.	.	.
Template Sequence		I	E	A	I	V	A	A	K	P	D	L	I	I	T	E	P	T	R	N	T	P	I	.	E	R	L	E	K	I	A	P	T	V	S	I	D	H	L	K	G	G	.	.	.	A	P	E	I	Y	R	K	L	A	E	L	T	G	T	Q	S	Q	L	A	I	L	E	R	R	Y	Q	A	Q	I	N	A	L	K	A	T	L
Template Known Secondary structure											S						T	T			S			.				T	T	T	S							T	T	T	T		.	.	.													T
Template Predicted Secondary structure																								.																			.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		172	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.							.	240	.
Predicted Secondary structure				.																																			.	.	.																																.	.	.	.	.	.
Query SS confidence				.																																			.	.	.																																.	.	.	.	.	.
Query Sequence		P	K	.	G	T	R	V	A	F	G	T	S	R	E	Q	Q	F	N	L	H	T	Q	E	T	W	T	G	S	V	L	A	S	L	G	L	N	V	.	.	.	P	A	A	M	A	G	A	S	M	P	S	I	G	L	E	Q	L	L	A	V	N	P	A	W	L	L	V	A	H	Y	R	.	.	.	.	.	.	E	E	S
Query Conservation				.																																			.	.	.																																.	.	.	.	.	.
Alig confidence				.																																			.	.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	Q	K	I	T	V	S	V	I	Q	A	N	Q	G	K	I	N	V	X	H	S	Y	H	S	L	G	R	V	L	R	D	A	G	F	R	F	P	P	L	I	E	S	I	P	E	G	G	R	X	D	V	S	A	E	R	L	P	E	L	D	A	D	F	V	F	A	T	W	R	G	D	T	G	G	K	P	Q	D	E
Template Known Secondary structure			G	G	G		B								T	T						S	S											T	T		B								S		T	T							G	G	G	G	G	G	G			S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		I	V	K	R	W	Q	Q	D	P	L	W	.	Q	M	L	T	A	A	Q	K	Q	Q	V	A	S	V	D	S	N	T	W	A	R	M	R	G	I	F	A	A	E	R	I	A	A	D	T	V	K	I	F	H	H	Q	P	L
Query Conservation													.
Alig confidence													.																				.
Template Conservation																																	.
Template Sequence		L	A	T	X	E	K	V	X	P	G	W	C	Q	F	L	T	A	C	R	S	G	R	Y	V	L	I	S	R	E	E	A	.	I	S	N	S	F	A	S	L	G	L	X	A	A	Q	I	Q	S	Q	I	A	G	R	P	L
Template Known Secondary structure							T	T	S	T	T	G	G	G	G						T	T											.				S																	S
Template Predicted Secondary structure																																	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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