Job Description P15028 Confidence 95.59% Date Thu Jan 5 11:34:12 GMT 2012 Rank 20 Aligned Residues 217 % Identity 12% Template c3aerC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark Resolution 2.80 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	F	A	D	A	L	A	A	V	D	V	I	P	I	G	I	A	D	D	N	D	A	K	R	I	L	P	E	V	R	A	H	L	K	P	W	Q	S	V	G	T	R	A	Q	P	S	L	E	A	I	A	A	L	K	P	D	L	I	I	A	D	S	S	R	H	A	G	V	Y	I	A	L	Q	Q	I	A	P	V	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Q	C	L	S	L	L	T	Q	L	G	V	G	P	V	R	M	L	P	A	R	R	.	.	.	.	.	.	.	.	.	.	.	S	D	I	E	P	A	V	G	P	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	I	L	A	Q	P	F	L	G	E	T	T	G	A	L	E	R	R	G	A	K	R
Template Known Secondary structure											T	T			S					S		S	S	.	.	.	.	.	.	.	.	.	.	.	G	G	G				B		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	T	T										T	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.												.	.	.	210	.	.	.	.	.	.	.														.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																												.																								.	.	.
Query SS confidence																												.																								.	.	.
Query Sequence		L	L	K	S	R	N	E	T	Y	A	E	N	L	Q	S	A	A	I	I	G	E	M	V	G	K	K	.	R	E	M	Q	A	R	L	E	Q	H	K	E	R	M	A	Q	W	A	S	Q	L	P	K	.	.	.	G	T	R	V	A	F	G	T	S	R	E	Q	Q	F	N	L	H	T	Q	E	T	W	T	G	S	V	L
Query Conservation																												.																								.	.	.
Alig confidence																												.																								.	.	.								.	.	.									.	.	.
Template Conservation																																																														.	.	.									.	.	.
Template Sequence		I	A	A	P	F	P	F	G	E	E	G	T	T	L	W	L	K	A	V	A	D	A	Y	G	V	S	A	E	K	F	E	A	V	T	A	A	P	R	A	R	A	K	K	A	I	A	A	H	L	E	T	L	T	G	K	S	L	F	M	F	.	.	.	P	D	S	Q	L	E	I	P	.	.	.	L	A	R	F	L	A
Template Known Secondary structure							S																T	T	T																													T	T							.	.	.		S	S	S					.	.	.
Template Predicted Secondary structure																																																														.	.	.									.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.				.	310	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.								.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.
Query Sequence		A	S	L	G	L	N	V	P	A	A	M	A	G	A	S	M	P	S	I	G	L	E	Q	L	L	A	V	N	P	A	W	L	L	V	A	H	Y	R	E	E	S	I	V	K	R	W	Q	Q	D	P	L	.	.	.	.	.	.	.	W	Q	M	L	T	A	A	Q	K	Q	Q	V	A	S	V	D	S	N	T	W	A	R
Query Conservation																																																					.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	C	G	M	K	T	T	E	I	A	T	P	F	L	H	K	A	I	M	A	P	D	L	A	L	L	P	S	N	T	A	L	T	E	G	Q	D	L	E	A	Q	L	D	R	H	E	A	I	N	P	D	L	T	V	C	G	L	G	L	A	N	P	L	E	A	K	G	H	A	T	K	W	A	I	E	L	V	F	T
Template Known Secondary structure			T	T										S				T	T	T	T					T	T	S		T	T																						S														T	T	T						S	G	G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		274	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		M	R	.	G	I	F	A	A	E	R	I	A	A	D	T	V	K	I	F
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		P	V	H	F	Y	E	Q	A	G	D	L	A	G	L	F	S	R	P	L
Template Known Secondary structure				S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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