Job Description P15028 Confidence 64.59% Date Thu Jan 5 11:34:12 GMT 2012 Rank 32 Aligned Residues 213 % Identity 10% Template c2xdqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex Resolution 2.40 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		F	A	D	A	L	A	A	V	D	V	I	P	I	G	I	A	D	D	N	D	A	K	R	I	L	P	E	V	R	A	H	L	K	P	W	Q	S	V	G	T	R	A	Q	P	S	L	E	A	I	A	A	L	K	P	D	L	I	I	A	D	S	S	R	H	A	G	V	Y	I	A	L	Q	Q	I	.	A	P	V	L	L
Query Conservation																																																																												.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	L	E	L	K	K	Q	G	I	K	V	S	G	W	L	P	A	K	R	Y	T	.	.	.	.	.	.	.	.	.	.	.	E	L	P	V	I	D	E	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	A	G	V	N	P	F	L	S	R	T	A	T	T	L	I	R	R	R	K	C	Q	L	I
Template Known Secondary structure							G	G	G	T								S		S	S	G	G	.	.	.	.	.	.	.	.	.	.	.	G						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	T	T											T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.												.	.	.	.	.	240	.	.	.														.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		L	K	S	R	N	E	T	Y	A	E	N	L	Q	S	A	A	I	I	G	E	M	V	G	K	K	.	R	E	M	Q	A	R	L	E	Q	H	K	E	R	M	A	Q	W	A	S	Q	L	P	K	G	T	R	V	A	F	G	T	S	R	E	Q	Q	F	N	L	H	T	Q	E	T	W	T	G	S	V	L	A	S	L	G
Query Conservation																											.
Alig confidence																											.																									.													.	.	.	.	.	.	.
Template Conservation																																																				.													.	.	.	.	.	.	.
Template Sequence		T	A	P	F	P	I	G	P	D	G	T	R	T	W	I	E	Q	I	C	A	T	F	G	I	Q	P	Q	G	L	A	E	R	E	A	E	T	W	Q	K	L	S	D	Y	L	E	L	V	R	G	K	.	S	V	F	F	M	G	D	N	L	L	E	I	.	.	.	.	.	.	.	S	L	A	R	F	L	I	R	C	G
Template Known Secondary structure						S	B																T	T					S											T	T								T	T		.								S	S				.	.	.	.	.	.	.									T	T
Template Predicted Secondary structure																																																				.													.	.	.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330								.	.	.	.	.	.	.	.	.	340
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.									.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.								.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Query Sequence		L	N	V	P	A	A	M	A	G	A	S	M	P	S	I	G	L	E	Q	L	L	A	V	N	.	.	.	.	.	.	.	.	P	A	W	L	L	V	A	H	Y	R	E	E	S	I	V	K	R	W	Q	Q	D	P	L	.	.	.	.	.	.	.	W	Q	M	L	T	A	A	Q	K	Q	Q	V	A	S	V	D	S	N
Query Conservation																										.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	R	V	L	E	I	G	I	P	Y	M	D	K	R	Y	Q	A	A	E	L	A	L	L	S	Q	T	C	A	E	M	G	H	P	L	P	T	I	V	E	K	P	D	N	Y	N	Q	L	Q	R	I	K	A	L	Q	P	D	L	V	I	T	G	M	A	H	A	N	P	L	E	A	R	G	I	S	T	K	W	S	V	E
Template Known Secondary structure										S																					T	T									S																S														T	B	T						T	T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		T	.	W	A	R	M	R	G	I	F	A	A	E	R	I	A	A	D	T	V	K	I	F
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		F	T	F	A	Q	I	H	G	F	G	N	A	R	D	I	L	E	L	V	T	R	P	L
Template Known Secondary structure					S			B	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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