Job Description P15028 Confidence 12.05% Date Thu Jan 5 11:34:12 GMT 2012 Rank 84 Aligned Residues 240 % Identity 10% Template c2ps3A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:high-affinity zinc uptake system protein znua; PDBTitle: structure and metal binding properties of znua, a2 periplasmic zinc transporter from escherichia coli Resolution 2.47 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																									.	.	.	.	.	.																					.	.
Query SS confidence																			.	.	.																									.	.	.	.	.	.																					.	.
Query Sequence		I	V	V	L	E	L	S	F	A	D	A	L	A	A	V	D	V	.	.	.	I	P	I	G	I	A	D	D	N	D	A	K	R	I	L	P	E	V	R	A	H	L	K	P	.	.	.	.	.	.	W	Q	S	V	G	T	R	A	Q	P	S	L	E	A	I	A	A	L	K	P	.	.	D	L	I	I	A	D	S	S
Query Conservation																			.	.	.																									.	.	.	.	.	.																					.	.
Alig confidence																			.	.	.																									.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		V	V	A	S	L	K	P	V	G	F	I	A	S	A	I	A	D	G	V	T	E	T	E	V	L	L	P	D	G	A	S	E	H	D	Y	S	L	R	P	S	D	V	K	R	L	Q	N	A	D	L	V	V	W	V	G	P	E	M	E	A	F	M	Q	K	P	V	S	K	L	P	G	A	K	Q	V	T	I	A	Q	L
Template Known Secondary structure					S	S											S	T	T	T						S	S		T	T			T	T	T													T		S							T	T	T		G	G	G						T	S		G	G	G				G	G	G
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																		.								.
Query SS confidence																																		.								.
Query Sequence		R	H	A	G	V	Y	I	A	L	Q	Q	I	A	P	V	L	L	L	K	S	R	N	E	T	Y	A	E	N	L	Q	S	A	.	A	I	I	G	E	M	V	.	G	K	K	R	E	M	Q	A	R	L	E	Q	H	K	E	R	M	A	Q	W	A	S	Q	L	P	K	G	T	R	V	A	F	G	T	S	R	E	Q	Q
Query Conservation																																		.								.
Alig confidence																																		.								.																														.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.
Template Sequence		E	D	V	K	P	L	L	M	K	S	H	G	D	F	N	M	H	L	W	L	S	P	E	I	A	R	A	T	A	V	A	I	H	G	K	L	V	E	L	M	P	Q	S	R	A	K	L	D	A	N	L	K	D	F	E	A	Q	L	A	S	T	E	T	Q	V	G	N	E	L	A	.	.	.	.	.	P	L	K	G	K
Template Known Secondary structure		T	T	T	G	G	G												G	G	G																					S	T	T																											G	.	.	.	.	.	G	G	T	T
Template Predicted Secondary structure																																																																								.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.								.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.
Query Sequence		F	N	L	H	T	Q	E	T	W	T	G	S	V	L	A	S	L	G	L	N	V	P	A	A	M	A	G	A	S	M	P	S	I	G	L	E	Q	L	L	A	V	.	.	.	.	.	.	.	N	P	A	W	L	L	V	A	H	Y	R	E	E	S	I	V	K	R	W	Q	Q	D	P	L	W	Q	M	L	T	A	A	Q
Query Conservation																																											.	.	.	.	.	.	.
Alig confidence												.																															.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation												.																																																												.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	F	V	F	H	D	A	Y	G	.	Y	F	E	K	Q	F	G	L	T	P	L	G	H	F	T	V	N	P	E	I	Q	P	G	A	Q	R	L	H	E	I	R	T	Q	L	V	E	Q	K	A	T	C	V	F	A	E	P	Q	F	R	P	A	V	V	E	S	V	A	R	G	.	.	.	.	.	.	.	.	.	T
Template Known Secondary structure						S	S					.							T											S	S	S																	T	T		S						T	T	S										T	T	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure												.																																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270										.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	Q	V	A	S	V	D	S	N	T	W	A	R	M	R	G	I	F	A	A	E	R	I	A	A	D	T	V	K	I	F	H	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	R	M	G	T	L	D	P	L	G	T	N	I	K	L	G	K	T	S	Y	S	E	F	L	S	Q	L	A	N	Q	Y	A	S	C
Template Known Secondary structure		S								T	T		T	T	S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions