Job Description P37657 Confidence 10.16% Date Thu Jan 5 11:56:30 GMT 2012 Rank 61 Aligned Residues 124 % Identity 14% Template c3dm5A_ PDB info PDB header:rna binding protein, transport protein Chain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. Resolution 2.51 Å

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		52	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		E	T	A	H	V	A	V	I	S	M	D	S	.	D	P	A	K	I	F	Q	L	D	D	S	Q	G	P	E	K	I	K	L	F	S	M	L	N	H	E	K	G	L	Y	Y	L	T	R	D	L	Q	C	S	I	D	P	H	N	Y	L	F	I	L	V	C	A	N	N	A	W	Q	N	I	P	A	E	R	L	R	S	W
Query Conservation														.
Alig confidence														.																																																						.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		R	G	Y	K	V	G	V	V	C	S	D	T	W	R	P	G	A	Y	H	Q	L	R	Q	L	L	D	R	Y	H	I	E	V	F	G	N	P	Q	E	K	D	A	I	K	L	A	K	E	G	V	D	Y	F	K	S	K	G	V	D	I	I	I	V	D	T	A	G	.	.	.	R	H	K	E	D	K	A	L	I	E	E
Template Known Secondary structure		T	T											S	S	T											G	G	G	T							T	T																		T	T		S									.	.	.		S	S
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	M	N	K	W	S	R	L	N	H	C	S	L	L	V	I	N	P	G	N	N	N	D	K	Q	F	S	L	L	L	E	E	Y	R	S	L	F	G	L	A	S	L	R	F	Q	G	D
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		M	K	Q	I	S	N	.	V	I	H	P	H	E	V	I	L	V	I	D	G	T	I	G	Q	Q	A	Y	N	Q	A	L	A	F	K	E	A	T	P	I	G	S	I	I	V	T	K	L	D	G
Template Known Secondary structure								.					S								G	G	G	G	G	G											S		T	T									S	S
Template Predicted Secondary structure								.
Template SS confidence
		204	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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