Job Description P37657 Confidence 18.26% Date Thu Jan 5 11:56:30 GMT 2012 Rank 35 Aligned Residues 166 % Identity 13% Template c2zjbB_ PDB info PDB header:recombination Chain: B: PDB Molecule:meiotic recombination protein dmc1/lim15 homolog; PDBTitle: crystal structure of the human dmc1-m200v polymorphic2 variant Resolution 3.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.
Predicted Secondary structure																.																														.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query SS confidence																.																														.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query Sequence		F	S	I	G	I	S	S	L	W	D	E	L	R	H	.	M	P	A	G	G	V	W	W	F	N	V	D	R	H	E	D	A	I	S	L	A	N	Q	T	I	A	S	Q	A	.	.	.	.	.	.	.	E	T	A	H	V	A	V	I	S	M	D	S	D	P	A	.	.	.	.	.	.	.	.	K	I	F	Q	L	D
Query Conservation																.																														.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Alig confidence																.																														.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	T	G	S	Q	E	F	D	K	L	L	G	G	G	I	E	S	M	A	I	T	E	A	F	G	E	F	R	T	G	K	T	Q	L	S	H	T	L	C	V	T	A	Q	L	P	G	A	G	G	Y	P	G	G	K	I	I	F	I	D	T	E	N	T	F	R	P	D	R	L	R	D	I	A	D	R	F	N	V	D
Template Known Secondary structure					S						T	T	T	T	S	S			S	S	S								S	S		T												T	T	S		B	T	T	T	B										S	S	S											G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.									.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																												.	.	.												.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.												.	.	.	.	.	.	.	.
Query Sequence		D	S	Q	G	P	E	K	I	K	L	F	S	M	L	N	H	E	K	G	L	Y	Y	L	T	R	D	L	Q	C	S	I	D	P	H	N	Y	L	F	I	L	V	C	.	.	.	A	N	N	A	W	Q	N	I	P	A	E	.	.	.	.	.	.	.	.	R	L	R	S	W	L	D	K	M	N	K	W	S	R	L	N
Query Conservation																																												.	.	.												.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	D	A	V	L	D	N	V	L	Y	A	R	A	Y	T	S	E	H	Q	V	E	L	L	D	Y	V	A	A	K	F	H	E	E	A	G	I	F	K	L	L	I	I	D	S	I	M	A	L	F	R	V	D	F	S	G	R	G	E	L	A	E	R	Q	Q	K	L	A	Q	M	L	S	R	L	Q	K	I	S	E	E	Y
Template Known Secondary structure						T	T	S								S	T	T																S		S	S									S	T							S		G	G	G																							T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	C	S	L	L	V	I	N	P	G	N	N	N	D	K	Q	F	S	L	L	L	E	E	Y	R	S	L	F	G	L	A	S	L	R	F	Q	G	D	Q	H	L	L
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.
Template Sequence		N	V	A	V	F	V	T	N	Q	M	G	H	I	.	.	.	.	.	.	.	.	.	L	A	H	A	S	T	T	R	I	S	L	R	K	G	R	G	E	L	R	I
Template Known Secondary structure		T													.	.	.	.	.	.	.	.	.				S	S	S								S	S	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.										.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions