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Job Description | P37657 | Confidence | 10.39% | Date | Thu Jan 5 11:56:30 GMT 2012 |
Rank | 58 | Aligned Residues | 116 |
% Identity | 7% | Template | c2j37W_ |
PDB info |
PDB header:ribosome | Chain: W: PDB Molecule:signal recognition particle 54 kda protein |
PDBTitle: model of mammalian srp bound to 80s rncs
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Resolution | 8.00 Å |
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52 | . | . | . | . | . | . | . | 60 | . | . | . | |
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Query SS confidence |   |
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Query Sequence |   |
E | T | A | H | V | A | V | I | S | M | D | S | . |
D | P | A | K | I | F | Q | L | D | D | S | Q | G | P | E | K | I | K | L | F | S | M | L | N | H | E | K | G | L | Y | Y | L | T | R | D | L | Q | C | S | I | D | P | H | N | Y | L | F | I | L | V | C | A | N | N | A | W | Q | N | I | P | A | E | R | L | R | S | W |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | G | W | K | T | C | L | I | C | A | D | T | F | R | A | G | A | F | D | Q | L | K | Q | N | A | T | K | A | R | I | P | F | Y | G | S | Y | T | E | M | D | P | V | I | I | A | S | E | G | V | E | K | F | K | N | E | N | F | E | I | I | I | V | D | T | S | G | . |
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R | H | K | Q | E | D | S | L | F | E | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | |
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131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | D | K | M | N | K | W | S | R | L | N | H | C | S | L | L | V | I | N | P | G | N | N | N | D | K | Q | F | S | L | L | L | E | E | Y | R | S | . |
L | F | G | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
M | L | Q | V | A | N | . |
A | I | Q | P | D | N | I | V | Y | V | M | D | A | S | I | G | Q | A | C | E | A | Q | A | K | A | F | K | D | K | V | D | V | A | S | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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205 | . | . | . | . | 210 | |
. | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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