Return to main results Retrieve Phyre Job Id

Job DescriptionP37657
Confidence10.39%DateThu Jan 5 11:56:30 GMT 2012
Rank58Aligned Residues116
% Identity7%Templatec2j37W_
PDB info PDB header:ribosomeChain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs
Resolution8.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60... ......70.........80.........90.........100.........110.........120.........130
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Query Sequence  ETAHVAVISMDS. DPAKIFQLDDSQGPEKIKLFSMLNHEKGLYYLTRDLQCSIDPHNYLFILVCANNAWQNIPAERLRSW
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Template Sequence  KGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSG. . . RHKQEDSLFEE
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   128.130.........140.........150.........160.........170.........180.........190... ......200....
 
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Query Sequence  LDKMNKWSRLNHCSLLVINPGNNNDKQFSLLLEEYRS. LFGL
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Template Sequence  MLQVAN. AIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASV
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   205....210 .........220.........230.........240.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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