Job Description P37657 Confidence 19.06% Date Thu Jan 5 11:56:30 GMT 2012 Rank 33 Aligned Residues 142 % Identity 15% Template c2dflA_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: crystal structure of left-handed rada filament Resolution 2.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																		.	.																																		.	.	.	.	.	.																	.	.	.	.	.	.	.
Query SS confidence																		.	.																																		.	.	.	.	.	.																	.	.	.	.	.	.	.
Query Sequence		P	V	F	S	I	G	I	S	S	L	W	D	E	L	R	H	.	.	M	P	A	G	G	V	W	W	F	N	V	D	R	H	E	D	A	I	S	L	A	N	Q	T	I	A	S	Q	A	E	T	A	H	.	.	.	.	.	.	V	A	V	I	S	M	D	S	D	P	A	K	I	F	Q	L	.	.	.	.	.	.	.
Query Conservation																		.	.																																		.	.	.	.	.	.																	.	.	.	.	.	.	.
Alig confidence												.						.	.																																		.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		K	K	I	S	T	G	S	Q	A	L	.	D	G	L	L	A	G	G	I	E	T	R	T	M	T	E	F	F	G	E	F	G	S	G	K	T	Q	L	C	H	Q	L	S	V	N	V	Q	L	P	P	E	K	G	G	L	S	G	K	A	V	Y	I	D	T	E	G	T	F	R	W	E	R	I	E	N	M	A	K	A	L
Template Known Secondary structure				B			S					.					T	S	S	B		T	T	S							S	T	T	S	S	T	T										S	S	S		G	G	G	T	S		S								S	S	S
Template Predicted Secondary structure												.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
				72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.									120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																	.	.	.	.	.	.	.	.							.	.
Query SS confidence		.	.																																																	.	.	.	.	.	.	.	.							.	.
Query Sequence		.	.	D	D	S	Q	G	P	E	K	I	K	L	F	S	M	L	N	H	E	K	G	L	Y	Y	L	T	R	D	L	Q	C	S	I	D	P	H	N	Y	L	F	I	L	V	C	A	N	N	A	W	.	.	.	.	.	.	.	.	Q	N	I	P	A	E	.	.	R	L	R	S	W	L	D	K	M	N	K	W	S	R
Query Conservation		.	.																																																	.	.	.	.	.	.	.	.							.	.
Alig confidence		.	.																																																	.	.	.	.	.	.	.	.							.	.
Template Conservation
Template Sequence		G	L	D	I	D	N	V	M	N	N	I	Y	Y	I	R	A	I	N	T	D	H	Q	I	A	I	V	D	D	L	Q	E	L	V	S	K	D	P	S	I	K	L	I	V	V	D	S	V	T	S	H	F	R	A	E	Y	P	G	R	E	N	L	A	V	R	Q	Q	K	L	N	K	H	L	H	Q	L	T	R	L	A	E
Template Known Secondary structure		T									T								S										T									T	T									T	T							S		T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	H	C	S	L	L	V	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	D	I	A	V	I	I	T	N
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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