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Job DescriptionP37657
Confidence19.06%DateThu Jan 5 11:56:30 GMT 2012
Rank33Aligned Residues142
% Identity15%Templatec2dflA_
PDB info PDB header:recombinationChain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: crystal structure of left-handed rada filament
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.. .......30.........40.........50..... ....60.........70.
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Query Sequence  PVFSIGISSLWDELRH. . MPAGGVWWFNVDRHEDAISLANQTIASQAETAH. . . . . . VAVISMDSDPAKIFQL. . . . . . .
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Template Sequence  KKISTGSQAL. DGLLAGGIETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGKAVYIDTEGTFRWERIENMAKAL
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GGGTS
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   87..90...... ...100.........110.........120.........130.........140.........150.........160.....
 
   72.......80.........90.........100.........110......... 120..... ....130.........
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Query Sequence  . . DDSQGPEKIKLFSMLNHEKGLYYLTRDLQCSIDPHNYLFILVCANNAW. . . . . . . . QNIPAE. . RLRSWLDKMNKWSR
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Template Sequence  GLDIDNVMNNIYYIRAINTDHQIAIVDDLQELVSKDPSIKLIVVDSVTSHFRAEYPGRENLAVRQQKLNKHLHQLTRLAE
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   140.........
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Query Sequence  LNHCSLLVIN
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Template Sequence  VYDIAVIITN
Template Known Secondary structure  TTT
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   246...250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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