Job Description P37657 Confidence 84.33% Date Thu Jan 5 11:56:30 GMT 2012 Rank 9 Aligned Residues 200 % Identity 13% Template c2cvhB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dna repair and recombination protein radb; PDBTitle: crystal structure of the radb recombinase Resolution 2.20 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.
Predicted Secondary structure																.																																																								.	.	.	.	.
Query SS confidence																.																																																								.	.	.	.	.
Query Sequence		V	F	S	I	G	I	S	S	L	W	D	E	L	R	.	H	M	P	A	G	G	V	W	W	F	N	V	D	R	H	E	D	A	I	S	L	A	N	Q	T	I	A	S	Q	A	E	T	A	H	V	A	V	I	S	M	D	S	D	P	A	K	I	F	Q	L	D	D	S	Q	G	.	.	.	.	.	P	E	K	I	K
Query Conservation																.																																																								.	.	.	.	.
Alig confidence																.																																																								.	.	.	.	.
Template Conservation
Template Sequence		M	L	S	T	G	T	K	S	L	D	S	L	L	G	G	G	F	A	P	G	V	L	T	Q	V	Y	G	P	Y	A	S	G	K	T	T	L	A	L	Q	T	G	L	L	S	G	K	K	V	A	Y	V	D	T	E	G	G	F	S	P	E	R	L	V	Q	M	A	E	T	R	G	L	N	P	E	E	A	L	S	R	F
Template Known Secondary structure			B			S								T	T	S	S	B		T	T	S							S	T	T	S	S														S							S	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.
Predicted Secondary structure																																														.	.	.	.	.																										.	.	.	.
Query SS confidence																																														.	.	.	.	.																										.	.	.	.
Query Sequence		L	F	S	M	L	N	H	E	K	G	L	Y	Y	L	T	R	D	L	Q	C	S	I	D	P	H	N	Y	L	F	I	L	V	C	A	N	N	A	W	Q	N	I	P	A	E	.	.	.	.	.	R	L	R	S	W	L	D	K	M	N	K	W	S	R	L	N	H	C	S	L	L	V	I	N	P	.	.	.	.	G	N
Query Conservation																																														.	.	.	.	.																										.	.	.	.
Alig confidence																																														.	.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		I	L	F	T	P	S	D	F	K	E	Q	R	R	V	I	G	S	L	K	K	T	V	D	S	N	F	A	L	V	V	V	D	S	I	T	A	H	Y	R	A	E	E	N	R	S	G	L	I	A	E	L	S	R	Q	L	Q	V	L	L	W	I	A	R	K	H	N	I	P	V	I	V	I	N	Q	V	H	F	D	S	R
Template Known Secondary structure								S	S																T	T										S		S	B	T	T	B																									T									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	D	K	Q	F	S	L	L	L	E	E	Y	R	S	L	F	G	L	A	S	L	R	F	Q	G	D	Q	H	L	L	D	I	A	F	W	C	N	E	K	G	V	S	A	R	Q	Q	L	S	V	Q	Q	Q	N	G	I
Query Conservation
Alig confidence																																											.
Template Conservation																																											.
Template Sequence		T	E	M	T	K	P	V	A	E	Q	T	L	G	Y	R	C	K	D	I	L	R	L	D	K	L	P	K	P	G	L	R	V	A	V	L	E	R	H	R	F	R	.	P	E	G	L	M	A	Y	F	R	I	T	E	R	G
Template Known Secondary structure		S	S				S	S		S	T	T						S									S	S	T	T										S	S	S	.		T	T									T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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