Job Description P37657 Confidence 33.02% Date Thu Jan 5 11:56:30 GMT 2012 Rank 24 Aligned Residues 142 % Identity 13% Template c1szpC_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament Resolution 3.25 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																		.	.																																.	.	.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence																		.	.																																.	.	.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		P	V	F	S	I	G	I	S	S	L	W	D	E	L	R	H	.	.	M	P	A	G	G	V	W	W	F	N	V	D	R	H	E	D	A	I	S	L	A	N	Q	T	I	A	S	Q	A	E	T	.	.	.	.	.	.	A	H	V	A	V	I	S	M	D	S	D	P	A	K	I	F	Q	L	.	.	.	.	.	.	.
Query Conservation																		.	.																																.	.	.	.	.	.																			.	.	.	.	.	.	.
Alig confidence												.						.	.																																.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		I	C	L	T	T	G	S	K	N	L	.	D	T	L	L	G	G	G	V	E	T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I	D	T	E	G	T	F	R	P	V	R	L	V	S	I	A	Q	R	F
Template Known Secondary structure							S					.					T	S	S			S	S	S							S	T	T	S	S												T	T	S		T	T	T	T			S	S							S	S	S				G	G	G	G							T
Template Predicted Secondary structure												.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
				72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																							.	.
Query SS confidence		.	.																																																							.	.
Query Sequence		.	.	D	D	S	Q	G	P	E	K	I	K	L	F	S	M	L	N	H	E	K	G	L	Y	Y	L	T	R	D	L	Q	C	S	I	D	P	H	N	Y	L	F	I	L	V	C	A	N	N	A	W	Q	N	I	P	A	E	.	.	R	L	R	S	W	L	D	K	M	N	K	W	S	R	L	N	H	C	S	L	L	V
Query Conservation		.	.																																																							.	.
Alig confidence		.	.																																																							.	.
Template Conservation
Template Sequence		G	L	D	P	D	D	A	L	N	N	V	A	Y	A	R	A	Y	N	A	D	H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	E	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	E	L	S	A	R	Q	M	H	L	A	K	F	M	R	A	L	Q	R	L	A	D	Q	F	G	V	A	V	V	V
Template Known Secondary structure									G	G	G								S	T	T									T							S										T	T	G	G	G			T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		148	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		324	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions