Job Description P37657 Confidence 7.70% Date Thu Jan 5 11:56:30 GMT 2012 Rank 91 Aligned Residues 128 % Identity 17% Template c1skyE_ PDB info PDB header:atp synthase Chain: E: PDB Molecule:f1-atpase; PDBTitle: crystal structure of the nucleotide free alpha3beta3 sub-complex of2 f1-atpase from the thermophilic bacillus ps3 Resolution 3.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.					.	.	.	.
Predicted Secondary structure																																																					.									.												.	.	.	.
Query SS confidence																																																					.									.												.	.	.	.
Query Sequence		R	D	I	V	D	P	V	F	S	I	G	I	S	S	L	W	D	E	L	R	H	M	P	A	G	G	V	W	W	F	N	V	D	R	H	E	D	A	I	S	L	A	N	Q	T	I	A	S	Q	A	E	.	T	A	H	V	A	V	I	S	.	M	D	S	D	P	A	K	I	F	Q	L	.	.	.	.	D	D	S	Q
Query Conservation																																																					.									.												.	.	.	.
Alig confidence																	.																																				.									.												.	.	.	.
Template Conservation																	.
Template Sequence		L	A	T	E	V	E	I	L	E	T	G	I	K	V	V	.	D	L	L	A	P	Y	I	K	G	G	K	I	G	L	F	G	G	A	G	V	G	K	T	V	L	I	Q	E	L	I	H	N	I	A	Q	E	H	G	G	I	S	V	F	A	G	V	G	E	R	T	R	E	G	N	D	L	Y	H	E	M	K	D	S	G
Template Known Secondary structure		B			S							S					.				S				T	T									S	S	S																	T										S	S															T	S
Template Predicted Secondary structure																	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																														.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.
Query Sequence		G	P	E	K	I	K	L	F	S	M	L	N	H	E	K	G	L	Y	Y	L	T	R	D	L	Q	C	S	I	.	.	.	.	.	.	D	P	H	N	Y	L	F	I	L	V	C	A	N	N	A	W	Q	N	I	P	A	E	R	L	R	S	W	L	D	K	M	N	K	W	S	R	L
Query Conservation																														.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	S	K	T	A	M	V	F	G	Q	M	N	E	P	P	G	A	R	M	R	V	A	L	T	G	L	T	M	A	E	Y	F	R	D	E	Q	G	Q	D	G	L	L	F	I	.	.	.	.	.	.	.	.	.	.	D	N	I	F	R	F	T	Q	A	G	S	E	V	S	A	L
Template Known Secondary structure		G	G	G	G								T	T	S																							S									.	.	.	.	.	.	.	.	.	.			T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.											.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions