Return to main results Retrieve Phyre Job Id

Job DescriptionP75818
Confidence31.47%DateThu Jan 5 12:14:31 GMT 2012
Rank11Aligned Residues72
% Identity17%Templatec3f7sA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:uncharacterized ntf2-like protein; PDBTitle: crystal structure of a ntf2-like protein of unknown function (pp_4556)2 from pseudomonas putida kt2440 at 2.11 a resolution
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130 .........140.........150.........160....
Predicted Secondary structure 

























.....













Query SS confidence 





































. . . . .

































Query Sequence  FSSRTTLPDSAHVASASTIPNRDARNIPLRVDLKQGDQ. . . . . GWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTL
Query Conservation 



 

 

  
 
    
 


  
           ..... 









   
 





 
    
 

 
Alig confidence 





































.....

































Template Conservation                                       
       
 
 
  
  
 




 
 
 
         
Template Sequence  CXGXCTGPXVFELAQLTVHAAGDLALAHWLNRCGPGDDESQCGFXRATVGYRRQGGQWQVIHEHWSAPFDXETQKAL
Template Known Secondary structure  T

S
TTSS
GGG
TT

B
TTT

B
Template Predicted Secondary structure 































Template SS confidence 












































































   60.........70.........80.........90.........100.........110.........120.........130......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions