Job Description P0AEJ2 Confidence 100.00% Date Thu Jan 5 11:23:28 GMT 2012 Rank 6 Aligned Residues 348 % Identity 24% Template c3gseA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:menaquinone-specific isochorismate synthase; PDBTitle: crystal structure of menaquinone-specific isochorismate synthase from2 yersinia pestis co92 Resolution 2.28 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		N	R	F	F	F	M	S	P	Y	R	S	F	T	T	S	G	C	F	A	R	F	D	E	P	A	V	N	G	D	S	P	D	S	P	F	Q	Q	K	L	A	A	L	F	A	D	A	K	A	Q	G	I	K	N	P	V	M	V	G	A	I	P	F	.	.	.	.	D	P	R	Q	P	S	S	L	Y	I	P	E	S	W
Query Conservation																																																																.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	F	Y	W	R	H	R	D	N	H	E	E	A	A	V	C	G	Q	T	R	S	F	A	.	.	.	.	.	.	.	.	.	.	.	.	D	M	K	D	A	D	D	F	I	Q	Q	N	P	D	A	N	G	L	R	I	W	G	L	N	A	F	E	P	V	M	V	N	A	Q	A	S	F	L	F	L	P	R	L	E
Template Known Secondary structure									T	T	S	S													S	.	.	.	.	.	.	.	.	.	.	.	.	S										T		T	T		T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.													.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.																									.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	F	S	R	Q	E	K	Q	A	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	F	T	R	S	Q	S	L	N	V	V	E	R	Q	A	I	P	E	Q	T	T	F	E	Q	M	V	A	R	A	A	A	L	T	A	T	P	Q	V	D	K	V	V	L
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		I	L	R	R	G	K	K	T	S	L	T	L	N	L	S	S	E	T	S	L	Q	K	D	A	L	Q	A	I	T	F	I	D	Q	L	M	A	A	R	A	L	P	V	L	N	A	R	I	Q	H	S	S	H	T	P	G	Y	P	Q	W	R	N	L	I	Q	Q	A	L	N	D	I	.	.	.	E	L	D	K	V	V	L
Template Known Secondary structure						T	T											S	S															T																					S																	.	.	.
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	L	I	D	I	T	T	D	A	A	I	D	S	G	V	L	L	E	R	L	I	A	Q	N	P	V	S	Y	N	F	H	V	P	L	A	D	G	G	V	L	L	G	A	S	P	E	L	L	L	R	K	D	G	E	R	F	S	S	I	P	L	A	G	S	A	R	R	Q	P	D	E	V	L	D	R	E	A	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	T	T	T	L	T	L	N	K	P	L	S	C	A	A	F	M	A	A	S	R	Q	V	N	H	R	C	Y	H	F	M	L	R	F	D	D	R	Q	A	F	L	G	S	S	P	E	R	L	Y	L	R	Q	Q	L	H	L	E	T	E	A	L	A	G	T	V	S	N	L	D	S	D	P	Q	A	A	V	L	A	D
Template Known Secondary structure										S	S																T	T								S	S	S	S																T	T															S	S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	A	S	E	K	D	R	H	E	H	E	L	V	T	Q	A	M	K	E	V	L	R	E	R	S	S	E	L	H	V	P	S	S	P	Q	L	I	T	T	P	T	L	W	H	L	A	T	P	F	E	G	K	A	N	S	Q	E	N	A	L	T	L	A	C	L	L	H	P	T	P	A	L	S	G	F	P	H	Q
Query Conservation
Alig confidence																																				.																								.
Template Conservation																																				.																								.
Template Sequence		W	L	M	H	D	E	K	N	Q	R	E	N	L	L	V	V	D	D	I	C	Q	R	L	Q	G	G	V	T	A	V	D	V	M	P	.	P	E	I	I	R	L	R	K	V	Q	H	L	R	R	R	I	C	A	Q	L	S	R	A	.	S	D	T	D	C	L	Q	R	L	Q	P	T	A	A	V	A	G	L	P	R	E
Template Known Secondary structure					T																				G	G	G									.							S	S													S	S		.										S	S								S
Template Predicted Secondary structure																																				.																								.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	T	Q	V	I	A	E	L	E	P	F	D	R	E	L	F	G	G	I	V	G	W	C	D	S	E	G	N	G	E	W	V	V	T	I	R	C	A	K	L	R	E	N	Q	V	R	L	F	A	G	A	G	I	V	P	A	S	S	P	L	G	E	W	R	E	T	G	V	K	L	S	T	M
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		A	A	R	Q	F	I	A	K	H	E	L	F	S	R	G	W	Y	A	G	S	A	G	Y	L	S	.	L	K	R	T	E	F	S	V	A	L	R	S	A	R	V	D	G	Q	Q	I	H	L	Y	A	G	A	G	I	V	A	G	S	D	A	E	Q	E	W	Q	E	I	L	Q	S	L	L	E	H
Template Known Secondary structure													S			T	T	T	T	S							.	S	S									S						T	T												T	T												G	G	G	S
Template Predicted Secondary structure																											.
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.		.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions