 |
Job Description | P11458 | Confidence | 25.03% | Date | Thu Jan 5 11:32:40 GMT 2012 |
Rank | 51 | Aligned Residues | 104 |
% Identity | 14% | Template | d1pswa_ |
SCOP info | UDP-Glycosyltransferase/glycogen phosphorylase
| UDP-Glycosyltransferase/glycogen phosphorylase
| ADP-heptose LPS heptosyltransferase II
|
Resolution | 2.00 |
|
 |
  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | Q | A | L | T | R | L | Q | E | E | Y | P | D | A | A | I | L | V | H | P | E | S | P | Q | A | I | V | D | M | A | D | A | V | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | T | S | Q | L | I | A | A | A | K | T | L | P | H | Q | R | L | I | V | A | T | D | R | G | I | F | Y | K | M | Q | Q | A |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|
|
|
|
|   |   |
|
|   |   |   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
| . | . | . |   |
|   |
|   |   |
|
|
|   |   |
|
|
|   |
|   |
Template Sequence |   |
A | E | L | A | K | Q | L | I | D | E | G | Y | Q | V | V | L | F | G | S | A | K | D | H | E | A | G | N | E | I | L | A | A | L | N | T | E | Q | Q | A | W | C | R | N | L | A | G | E | T | Q | L | D | Q | A | V | I | L | I | A | A | C | . |
. |
. |
K | A | I | V | T | N | D | S | G | L | X | H | V | A | A | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
|
| G | G | G |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  | T | T |  |  |  |
| T | T | T | S |
|  |  |  |  |  |  |  |  |  | T | S | . | . | . | S |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | |
|
|
. | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . |
  |
  |   |
274 | . | . | . | . | . | 280 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | P | D | K | E | L | L | E | A | P | T | A | G | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | A | T | C | R | S | C | A | H | C | P | W | M | A | M | N | G | L | Q | A | I | A | E | A | L | E | Q |
Query Conservation |   |
  |
|
|
|   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |
Template Sequence |   |
N | R | P | L | V | A | L | Y | G | P | S | S | P | D | F | T | P | P | L | S | H | K | A | R | V | I | R | L | I | T | G | E | G | Y | H | Q | S | L | I | D | I | T | P | Q | R | V | L | E | E | L | N | A |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |  | S | S | S |
| T | T | S | S |
|
|
|
| T | T |  |  |  |  |  | S | S |
|
|
|
|
|
|  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|