Return to main results Retrieve Phyre Job Id

Job DescriptionP11458
Confidence52.59%DateThu Jan 5 11:32:40 GMT 2012
Rank9Aligned Residues146
% Identity21%Templated16pka_
SCOP infoPhosphoglycerate kinase Phosphoglycerate kinase Phosphoglycerate kinase
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.........80.........90.... .....100.........110.........120.........130.........140
Predicted Secondary structure 










.




















Query SS confidence 
































.













































Query Sequence  GGCISDSLEMARFGAKHPASTLLVAGVRFMGET. AKILSPEKTILMPTLQAECSLDLGCPVEEFNAFCDAHPDRTVVVYA
Query Conservation 
  
 


 


 
    
  





 




.



 
 
 




  






    
         
   

 

Alig confidence 
















.








..



.




.........































Template Conservation 







 

  

 
.

 




 ..

 


 
 
.........  

 

 
   
  
  

  
   
  
 
Template Sequence  GAKVSDKIQLLDNMLQR. IDYLLIGGA. . MAYTFLKAQG. . . . . . . . . YSIGKSKCEESKLEFARSLLKKAEDRKVQVIL
Template Known Secondary structure  SS
SGGGGGG.
S
TT..T.........


TT



GGGTT

Template Predicted Secondary structure 


.

..

.........











Template SS confidence 















































































   217..220.........230... ......240.. .......250.. .......260.........270.........280....
 
   141........150.........160 .........170.........180.........190.........200.........210....
Predicted Secondary structure 






......











Query SS confidence 



















. . . . . .





















































Query Sequence  NTSAAVKARADWVVTSSIAV. . . . . . ELIDHLDSLGEKIIWAPDKHLGRYVQKQTGGDILCWQGACIVHDEFKTQALTRL
Query Conservation 







 


 





 ...... 

  
  
   


 

  

  

  


 

 
 
 
 

  
  
 
   
Alig confidence 

........









......







.




























................
Template Conservation 

........
                    

 .    




 

      
  



 


................
Template Sequence  PI. . . . . . . . DHVCHTEFKAVDSPLITEDQNIPE. GHMALDIGPKTIEKYVQTIGKCKSAIWNG. . . . . . . . . . . . . . . .
Template Known Secondary structure 
S........SSSSS

SS

SSS


T.T

TT
SS................
Template Predicted Secondary structure 

........

















.





................
Template SS confidence 















































































   285. ...290.........300.........310 .........320.........330.........
 
   215....220.........230.........240.........250. ........
Predicted Secondary structure 














....



Query SS confidence 




































. . . .







Query Sequence  QEEYPDAAILVHPESPQAIVDMADAVGSTSQLIAAAK. . . . TLPHQRLI
Query Conservation 
   
 
 






  

   

 



  

  
 ....      

Alig confidence  ...............





















....







Template Conservation  ...............
 



   

 

  
  


  
    
 


Template Sequence  . . . . . . . . . . . . . . . PMGVFEMVPYSKGTFAIAKAMGRGTHEHGLMSII
Template Known Secondary structure  ...............
SS
TTSGGG


Template Predicted Secondary structure  ...............















Template SS confidence 
















































   340.........350.........360.........370...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions