Return to main results Retrieve Phyre Job Id

Job DescriptionP11458
Confidence14.70%DateThu Jan 5 11:32:40 GMT 2012
Rank94Aligned Residues67
% Identity15%Templatec2o7qA_
PDB info PDB header:oxidoreductase,transferaseChain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50. ...... ..60... ......70.........80.
Predicted Secondary structure 











.............

.....







Query SS confidence 































. . . . .





. . . . . . . .





. . . . .

















Query Sequence  PLSIDEKAYYREKIKRLLKERNAVMVAHYYTD. . . . . PEIQQL. . . . . . . . AEETGG. . . . . CISDSLEMARFGAKHPAS
Query Conservation           
   
  




 





 

 .....



 
........

 

 ..... 
 


 


 
    
 
Alig confidence 































.....





........





.....

















Template Conservation 



         
         

 
 
 
  

    
          







       
   

        
Template Sequence  DVELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVP
Template Known Secondary structure  TTT


SS

SS



TT
S
SSGGG
SS
Template Predicted Secondary structure 




























Template SS confidence 















































































   186...190.........200.........210.........220.........230.........240.........250.........260.....
 
   82....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  TLLVA
Query Conservation   



Alig confidence 




Template Conservation   
   
Template Sequence  TIGLV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   266...270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions