Job Description P11458 Confidence 37.26% Date Thu Jan 5 11:32:40 GMT 2012 Rank 28 Aligned Residues 80 % Identity 18% Template c1s1hB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		S	I	A	V	E	L	I	D	H	L	D	S	L	G	E	K	I	I	W	A	P	D	K	H	L	G	R	Y	V	Q	K	Q	T	G	G	D	I	L	C	W	Q	G	A	C	I	V	H	D	E	F	K	T	Q	A	L	T	R	L	Q	E	E	.	.	.	Y	P	D	A	A	I	L	V	H	P	E	S	P	Q	A	I
Query Conservation																																																															.	.	.
Alig confidence												.																											.	.	.	.																					.	.	.
Template Conservation												.																											.	.	.	.
Template Sequence		V	L	A	A	R	I	I	A	A	I	.	P	N	P	E	D	V	V	A	I	S	S	R	T	F	G	Q	R	A	V	L	K	F	A	A	H	T	.	.	.	.	G	A	T	P	I	A	G	R	F	T	P	G	S	F	T	N	Y	I	T	R	S	F	K	E	P	R	L	V	I	V	T	D	P	R	S	D	A	Q	A
Template Known Secondary structure											T	.	T	T	T									S													T	S	.	.	.	.	S						S				T	T	T	T	T	T	T	T	T	S		S				S					S		T	T	T	T
Template Predicted Secondary structure												.																											.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		234	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	M	A	D	A	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	E	A	S	Y	V	N
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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