|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | A | L | L | L | E | Q | Q | D | G | K | T | L | A | S | V | Q | T | L | D | E | S | R | L | P | E | G | D | V | T | V | D | V | H | W | S | S | L | N | Y | K | D | A | L | A | I | T | G | K | G | K | I | I | R | N | F | P | M | I | P | G | I | D | F | A | G | T | V | R | T | . |
. |
S | E | D | P | R | F | H |
Query Conservation |   |
|
|
|   |
|   |   |   |   |
|   |
|   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |   |   |
|   |   | . | . |
|   |
|   |
|
|
|   |
|   |
|   |   |   |
|
|
|
|   |
|   |   |   |
|
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
M | K | A | A | V | V | H | A | Y | G | A | P | . |
. |
L | R | I | E | E | V | K | V | P | L | P | G | P | G | Q | V | L | V | K | I | E | A | S | G | V | C | H | T | D | L | H | A | A | E | G | D | W | P | V | K | P | P | L | P | F | I | P | G | H | E | G | V | G | Y | V | A | A | V | G | S | G | V | T | R | V | K |
Template Known Secondary structure |   |
 |  |  |  |  | B |
| S | T | T | S |
| . | . |
|  |  |  |  |  |  |
|
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | T |
| S | S | S |
|
|
| S | S | B |
|
|
| S |
|  |  |  |  |  |  |  |  |
| T | T |
|
| S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
| . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | |
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | Q | E | V | L | L | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | W | G | V | G | E | N | H | W | G | G | L | A | E | Q | A | R | V | K | G | D | W | L | V | A | M | P | Q | G | L | D | A | R | K | A | M | I | I | G | T | A | G | F | T | A | M | L | C | V | M |
Query Conservation |   |
  |
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |
|
|   |   |
|   | . |
Template Sequence |   |
E | G | D | R | V | G | I | P | W | L | Y | T | A | C | G | C | C | E | H | C | L | T | G | W | E | T | L | C | E | S | Q | Q | N | T | G | Y | S | V | N | G | G | Y | A | E | Y | V | L | A | D | P | N | Y | V | G | I | L | P | K | N | V | K | A | T | I | H | P | G | K | L | D | D | I | N | Q | I | L | D | Q | M | . |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |
| S |  |  |  |
|
| S | S | S |  |  |  |  | T | T |
| G | G | G |
| T | T |
|  |  | B | T | T | T | B |
|
| S | S | B | S |  |  |  |  |
| T | T | T | S |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
  |
  |   |
137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | E | D | A | G | V | R | P | Q | D | G | E | I | V | V | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |   |   |   |
|   | . |
|   |   |
|
|
|
|
Template Sequence |   |
. |
. |
. |
R | A | G | Q | I | E | . |
G | R | I | V | L | E | M |
Template Known Secondary structure |   |
. | . | . |  | T | T |
|
| S | . | S |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
. | . | . |  |  |
|
|
|
| . |
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
330 | . | . | . | . | . | |
. | . | . | . | 340 | . | . |
  |